Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01634 ATGAAGACTACTGCTACTGCTCTCTCTATAAATCCCTCTTTCCCTCCTCCCCTTTCTTCAGCTGCAACCACACCTTCTTCTACAACTTCTTCATACCTTCTTAACCCTGCTAGATTTCAACGCTTTCAATCGTTTGGAGCGAAACCCATTACTCTTTCTTGCAGAGGAGCACGATTGTGCTCTTTTCATGGGTCGAAAACTGTGAAGGGTAGGAAAAGATTGGTTTTTGAAGCTAGAAACATGGCCACAACAGCAGAGGTTGATTCTCATGAAGAGGAAGAGAAGGAAGAGGGTACTTCTTCTGCTTTGCTTGACTCTGGGAATGAGAACAATTCAAGGCCTCGTCGAATTGCTCTCTTTGTTGAGCCTTCTCCCTTTGCATATGTCTCAGGATACAAAAATCGGTTTCAGAATTTTATTAAATGCCTTCGTGAAATGGGAGATGAGGTGATGGTTGTGACAACGCATAAGGGAGTGCCCCAGGAATTTTATGGAGCCAAAGTGATCGGATCTTGGAGCTTTCCCTGCCCTTGGTATCAGAAAGTACCTCTCTCCTTGGCACTTAGTCCAAGAATAATTTCAGAGGTAGCTCAGTTTAAGCCTGACATAATACACGCATCATCACCGGGCATAATGGTTTTTGGTGCTCTTATCATTGCGAAACTTTTGTGTGTTCCAATTGTCATGTCCTATCATACCCATGTACCAGTGTACATTCCAAGATATACCTTTAGTTGGCTGGTGAAACCAATGTGGTTGATCATAAAATTTCTTCACAGAGCAGCTGATCTGACTCTGGTGCCATCAGTTGCCATTGGGAGGGATCTCCAAGCAGCTAGAGTAACAGCAGCTAACAAGATTCGTCTTTGGAACAAGGGTGTTGATTCTGACAGTTTCCATCCTCGATACCGCTCACATGAAATGCGATTAAGACTAAGCAATGGTGAACCAGAGAAACCCTTGATAGTTCATGTTGGACGGCTTGGAGTTGAGAAGAGTTTAGATTTTCTCAAAAAGCTCATGGATAGGCTTCCTGAAGCACGAATTGCTTTCATTGGAGATGGACCGTACAGGGAGGAGCTGGAGAAAATGTTTGAAGGTATGCCAGCAGTATTCACTGGAATGTTAGGAGGGGAAGAACTCTCTCAAGCATATTCAAGTGGAGATGTATTTGTCATGCCTTCAGAGTCAGAGACCCTTGGACTTGTTGTTTTGGAGGCCATGTCTTCAGGGATCCCTGTAGTAGCTGCACGTGCAGGAGGCATTCCAGATATAATACCTGCAGATCAAGAGGGTAAAACTGGTTATCTCTATAATCCAGGAGACCTTGAAGACTGCTTGAGTAAATTGAAGCCCCTTTTGCTCAACCAAGACTTGAGAGAAACCATGGGAAAAGCTGCACGCGATGAGATGGAGAAGTTTGATTGGAAGGCAGCCACGCGAAAGGTTCGCAATGAACAATACAATGCTGCCATTTGGTTCTGGCGCAAGAAAAGGGCTCAACTATTGAAACCTGTACAATGGCTGGCCAAACGTTTTTTCCCATCACCACAAGTCAACTACAGGTGA 1569 0.4442 MKTTATALSINPSFPPPLSSAATTPSSTTSSYLLNPARFQRFQSFGAKPITLSCRGARLCSFHGSKTVKGRKRLVFEARNMATTAEVDSHEEEEKEEGTSSALLDSGNENNSRPRRIALFVEPSPFAYVSGYKNRFQNFIKCLREMGDEVMVVTTHKGVPQEFYGAKVIGSWSFPCPWYQKVPLSLALSPRIISEVAQFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSVAIGRDLQAARVTAANKIRLWNKGVDSDSFHPRYRSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKKLMDRLPEARIAFIGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYSSGDVFVMPSESETLGLVVLEAMSSGIPVVAARAGGIPDIIPADQEGKTGYLYNPGDLEDCLSKLKPLLLNQDLRETMGKAARDEMEKFDWKAATRKVRNEQYNAAIWFWRKKRAQLLKPVQWLAKRFFPSPQVNYR. 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01634 522 Gene3D Glycogen Phosphorylase B; 294 474 - -
Seca2g01634 522 FunFam sulfoquinovosyl transferase SQD2 312 474 - -
Seca2g01634 522 FunFam Sulfoquinovosyl transferase SQD2 116 311 - -
Seca2g01634 522 Pfam Glycosyl transferases group 1 317 469 IPR001296 GO:0016757
Seca2g01634 522 CDD GT4-like 116 488 - -
Seca2g01634 522 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 112 499 - -
Seca2g01634 522 Pfam Glycosyltransferase Family 4 134 297 IPR028098 -
Seca2g01634 522 Gene3D Glycogen Phosphorylase B; 131 478 - -
Seca2g01634 522 MobiDBLite consensus disorder prediction 1 29 - -
Seca2g01634 522 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 117 484 - -
Seca2g01634 522 MobiDBLite consensus disorder prediction 84 100 - -
Seca2g01634 522 MobiDBLite consensus disorder prediction 84 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01634 Seca-Chr2 29643090 29648416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01634 6 430 Glycosyltransferase AT5G01220 70.302 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01634 K06119 - gmx:100807850 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10737 4 244329548 244332918 Seca2g01634 2 29643090 29648416 PCT