Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01166 ATGGCTTCTTCGGAAGCCGATTCCCGGCTTAGCCAGGTCATCGTCCCCGCCCTCGAGAAAATCATCAAAAACGCTTCGTGGAGAAAGCACGCGAAGCTCGCTCACGAGTGCAAATCTATTGTCGAAACCCTCACCTCGCCGCAGAAGCTCCATGAAGACGCCGCCGGCGAAGCCGAGGCATCCGTCCCTGGCCCGCTCCACGACGGAGGCCCCGTCGAGTACTTGCTTGCTGAGTCCGAATCGATTCTCTCCCCTCTCATCAACGCCGCTGGCTCTGGCGTCTTGAAGATCGCCGATCCCGCCGTCGACGCCATCCAGAAACTCATCGCTCTCGGCTACCTCCGCGGCGAGGCGGACGCCGCCGGAGGATGCCCCGAGTCCAAGCTTTTGGCGAGCCTGATCGAATCGGTGTGCAAGTGCCACGACCTAGGCGACGAGGCCATGGAACTTCTGGTGCTGAAGACGCTCTTATCCGCAGTAACGTCGATTTCATTGAGAATTCACGGTGATTGTTTGCTTTTGATTGTGAGAACTTGTTATGATATATATCTTGGTAGCAAGAATGTGGTGAATCAAACGACTGCTAAGGCGTCTTTGATTCAGATGTTGGTGATTGTGTTTAGGAGGATGGAGGCGGATTCGTCCACGGTTCCGATTCAGCCCATTGTGGTGGCTGAATTGATGGAACCTGTGGAAAAATCTGATGTAGATAGTTCAATGACACAGTTTGTGCAGGGTTTTATCACTAAGATTATGCAGGACATTGATGGGGTTTTGAACCCGGCAGCAACACCAAGTTCGGCATTGAGTGGTCATGACGGCGCATTTCAGACCACCGCTACGGTGGAGACCACAAATCCAGCAGATTTGTTGGATTCCACTGACAAGGACATGTTGGATGCCAAGTATTGGGAGATCAGTATGTACAAGACAGCTTTGGAGGGAAGGAAAGGGGAGCTGGTGGATGGGGAGTTGGTAGAGAGGGATGATGATTTGGAGATTCAGATTGGGAATAAGCTGAGGAGGGATGCTTTTTTGGTGTTCAGGGCGCTTTGTAAATTGTCTATGAAGACGCCCCCTAAGGAGGCCTCAGCTGACCCACAGTTGATGAAGGGGAAGATTGTGGCTTTGGAGTTGTTGAAGATTTTGCTGGAGAATGCAGGAGCTGTCTTCAGGACTAGTGAAAGGTTTTTGGGTGCCATCAAACAGTACTTATGCTTATCATTGTTGAAGAACAGTGCTTCAACTCTTATGATCGTATTTCAGCTATCATGCTCCATCTTCATCAGTCTGGTATCAAGATTTAGAGCTGGATTGAAAGCAGAAATTGGAGTGTTTTTCCCCATGATTGTTCTCAGGGTTCTAGAAAATGTTGCTCAACCTAATTTTCAGCAAAAGATGATAGTGCTTCGTTTTCTAGAGAAACTTTCTGTTGATTCACAGATATTGGTAGACATTTTTCTCAACTATGACTGTGATGTCAATTCATCAAACATATTTGAGAGGATGGTCAACGGACTTCTTAAAACTGCCCAAGGCATCCCTCCTGGTGTAACAACCACACTTTTACCACCTCAAGAGGCAACTATGAAACTTGAAGCCATGAAATGCTTGGTTGCTGTTTTAAAATCAATGGGAGACTGGGTGAACAGACAATTGCGGATTCCAGATCCTCAATCAGGCAAGAAAATTGAAGCAGTTGACAATGGCCATGAAGCTGGAGGTCTTCCCATGGTAAATGGGAATGGAGAAGAGCCGATTGAAGGATCAGACACTCATTCTGAAATGTCCAATGAGGCATCTGATGTTTCAACTATTGAGCAACGCAGGGCTTACAAATTAGAACTTCAGGAAGGTATATCACTTTTTAATAGGAAGCCAAAGAAAGGAATTGAGTTCCTCATCAATGCCAATAAAGTGGGTAGTTCACCAGAGGATATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATTGGTGATTATCTGGGAGAAAGAGAAGAATTATCCTTGAAAGTAATGCATGCCTATGTGGATTCTTTTGACTTCCAAGGGATGGAGTTTGATGAGGCAATCAGGGTCTTCCTTCAAGGCTTTAGACTGCCTGGTGAGGCACAAAAAATTGATCGAATCATGGAAAAGTTTGCTGAACGTTATTGCAAATGTAATCCGAAAGTCTTCTCTAGCGCTGATACAGCATACGTCCTTGCCTATTCTGTGATAATGCTGAATACTGATGCTCATAATCCTATGGTGAAGAGCAAGATGTCTGCTGATGATTTCATAAGAAACAATCGTGGCATAGATGATGGAAAAGATATACCAGAGGAATATTTGAGGTCATTGTTTGAGAGAATATCTAGAAATGAGATCAAAATGAAAGAAAATGATTTTGAACCCCAACAGAGACAGGCTGTGAACCCTAACAGACTTTTAGGCTTGGATAGTATATTGAATATCGTGATTCGTAAGCGCGGCGAAGACAGTCATATGGAGACCAGTGATGATCTAATTCGGCGTATGCAGGAACAATTCAAAGAGAAAGCTCGAAAAACTGAGTCAGTCTATTATGCAGCAACTGATGTCGTAATCCTTAGATTCATGATTGAGGTGTGTTGGGCTCCAATGTTAGCTGCTTTCAGTGTTCCTCTTGACCAAAGTGGTGATGAATTTGTAATAGCTCTGTGTCTTGAAGGCTTCCGCTATGCTATTCATGTTACTTCTGTGATGTCCATGAAGACACATAGAGATGCTTTTGTGACTTCATTAGCAAAGTTTACCTCCCTGCATTCTCCTGCTGATATTAAGCAAAAAAATGTTGATGCAATCAAGGTGATAGTTACTATTGCTGATGAGGATGGGAATTACTTACAAGAAGCTTGGGAGCATATCTTGACCTGTGTTTCCCGATTTGAGCATCTACATCTTCTCGGAGAGGGTGCTCCCCCAGATGCTACCTTCTTTGCTTTTCCTCAGAATGATTCTGAAAAAGCAAAGCAAACAAAATCAACTATTCTTCCGGTTTTGAAGAAGAAGGGAGCTGGGAGGATGCAGTATGCAGCTGCCACAGTGATGCGGGGTTCATATGATAGTGCTGGAATTGGCAGTAATGCTTCTGGAGCCGTCACATCAGAACAGGTAAACAATCTAGTTTCCAATTTGAACCTGTTGGAACAAGTTGGAAGCTCGGAAATGAATCGCATATTCACTCGGAGTCAAAAGTTGAACAGTGAGGCCATAATAGATTTTGTTAAGGCTTTATGCAAGGTCTCCATGGAAGAACTGAGATCTCCATCCGATCCACGGGTGTTCAGCCTTACAAAGATAGTTGAGATTGCGCACTATAATATGAATCGCATCAGGCTTGTGTGGTCAAGCATCTGGCATGTTCTTTCAGATTTCTTTGTAACCATTGGTTGTTCAGGAAACCTTTCAATTGCAATTTTCGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTTGAGCGGGAAGAGTTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTCGTCATTGTCATGCGAAAGAGTAGAGCGGTTGAAATTAGAGAACTTATTATCAGATGCGTCTCTCAAATGGTTTTATCTCGTGTCAACAATGTCAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCATATGATGACCACAAAAACATTGTACTATTGGCTTTTGAAATTATTGAGAAGATTATTCGAGAATACTTCCCATACATCACTGAGACTGAAACTACCACCTTTACAGATTGTGTGAATTGTCTAATTGCATTCACCAATAGTAGATTTAACAAAGAGATTAGCCTAAATGCTATTGCTTTTCTTCGATTCTGTGCAACAAAACTAGCGGAAGGAGACCTTGGCTCTTCGTCAAGGAATAAGGACAAGGAAACTCTTGGAAAGATTTCCACCCCTTCACCTCGAACAGGAAAAGAGGGGAAACAAGACAATGGAGAGGTGACAGACAAGGATGATCATCTCTATTTCTGGTTTCCATTATTGGCTGGTTTGTCTGAGCTTAGCTTTGACCCAAGGTCTGAGATAAGGCAGAGTGCTTTGCAAGTCCTATTTGAAACCTTACGCAACCATGGCCACCTCTTTTCACTTCCATTATGGGAGAGAGTATTTGAATCAGTCCTATTTCCAATATTTGATTATGTTCGTCATGCTATTGATCCTTCAGGGAGTAGCTCCCAGGTCAATGAAGTTGAGACTGATGCTGAGCTCGATCAAGATGCATGGCTTTATGAGACATGCACATTAGCCCTCCAATTAGTGGTAGATCTTTTTGTCAACTTCTATACCACTGTTAATCCACTTCTAAGAAAGGTGCTGATGCTCCTTGTAAGCTTTATAAAGCGCCCTCATCAAAGCCTGGCTGGCATTGGTATTGCTGCATTTGTTCGTTTGATGAGTAATGCTGGGGAGCTGTTTTCTGATGAAAAGTGGTTAGAAGTGGTTTTGTCACTAAAAGATGCAGCAAATGCAACACTCCCTAACTTCTCATTCCTTGACAGTGGAGACTTCGTGACTGGAAATCAACATGCTTTAACAGCTGAAGATGACAGGGATCCTTCTGAGTCTGGCTCACCTGATAATTTAGAAAGCCAGAGGAGTCGACGTCTTCATGCATATTTATCTGATGCAAAATGCCGAGCTGCTGTTCAGCTCTTATTGATTCAGGCGGTGATGGAGATCTATAACATGTACCGGTCTCATCTTTCAGCAAAAGCCATGCTAGTCCTGTTTGATGCTTTGCATGATGTGGCATTACATGCTCACAGGATTAACAGAAATACTATTTTACGTTCGAAGTTACAAGAATTTGGCTCTATGACCCAAATGCAGGACCCTCCATTGTTACGCCTTGAGAATGAGTCCTACCAAATATGCCTCACATTTTTACAGAACCTTGTTGTGGATAGGCCTCCTAGTTATGAGGAGGCTGAGGTTGAGACTCACCTTGTTCGGCTTTGTCAGGAGGTCTTGGAGTTTTATATTGAAGTTGCAAGTTCTGGACAGGTATCTGAATCTTCTTATGGTAGACAGCAACATTGGTTAATTCCTCTAGGCTCTGGGAAGCGAAGAGAATTGGCTGCACGAGCACCACTTGTTGTGGCTACTCTTCAGGCTATTAGTAATTTGGGAGATATTTCTTTTGAGAAGAACCTGGCCCATTTTTTCCCTCTTCTCTCAAGGTTGATAAGTTGTGAACATGGGTCAACTGAGGTCCAGGTAGCTCTCAGTGATATGCTTAGTTTATCAGTTGGTCCGCTTTTGCTACGGTCATGTTGA 5340 0.4358 MASSEADSRLSQVIVPALEKIIKNASWRKHAKLAHECKSIVETLTSPQKLHEDAAGEAEASVPGPLHDGGPVEYLLAESESILSPLINAAGSGVLKIADPAVDAIQKLIALGYLRGEADAAGGCPESKLLASLIESVCKCHDLGDEAMELLVLKTLLSAVTSISLRIHGDCLLLIVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMEPVEKSDVDSSMTQFVQGFITKIMQDIDGVLNPAATPSSALSGHDGAFQTTATVETTNPADLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGELVERDDDLEIQIGNKLRRDAFLVFRALCKLSMKTPPKEASADPQLMKGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLMIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLEKLSVDSQILVDIFLNYDCDVNSSNIFERMVNGLLKTAQGIPPGVTTTLLPPQEATMKLEAMKCLVAVLKSMGDWVNRQLRIPDPQSGKKIEAVDNGHEAGGLPMVNGNGEEPIEGSDTHSEMSNEASDVSTIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGSSPEDIAAFLKDASGLNKTLIGDYLGEREELSLKVMHAYVDSFDFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKVFSSADTAYVLAYSVIMLNTDAHNPMVKSKMSADDFIRNNRGIDDGKDIPEEYLRSLFERISRNEIKMKENDFEPQQRQAVNPNRLLGLDSILNIVIRKRGEDSHMETSDDLIRRMQEQFKEKARKTESVYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSGDEFVIALCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVDAIKVIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKAKQTKSTILPVLKKKGAGRMQYAAATVMRGSYDSAGIGSNASGAVTSEQVNNLVSNLNLLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSGNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSRAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCATKLAEGDLGSSSRNKDKETLGKISTPSPRTGKEGKQDNGEVTDKDDHLYFWFPLLAGLSELSFDPRSEIRQSALQVLFETLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGSSSQVNEVETDAELDQDAWLYETCTLALQLVVDLFVNFYTTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVLSLKDAANATLPNFSFLDSGDFVTGNQHALTAEDDRDPSESGSPDNLESQRSRRLHAYLSDAKCRAAVQLLLIQAVMEIYNMYRSHLSAKAMLVLFDALHDVALHAHRINRNTILRSKLQEFGSMTQMQDPPLLRLENESYQICLTFLQNLVVDRPPSYEEAEVETHLVRLCQEVLEFYIEVASSGQVSESSYGRQQHWLIPLGSGKRRELAARAPLVVATLQAISNLGDISFEKNLAHFFPLLSRLISCEHGSTEVQVALSDMLSLSVGPLLLRSC. 1780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01166 1779 MobiDBLite consensus disorder prediction 571 604 - -
Seca2g01166 1779 FunFam Brefeldin A-inhibited guanine nucleotide-exchange 1 687 805 - -
Seca2g01166 1779 Pfam BIG2 C-terminal domain 1570 1768 IPR046455 -
Seca2g01166 1779 MobiDBLite consensus disorder prediction 1533 1552 - -
Seca2g01166 1779 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 341 499 IPR032691 -
Seca2g01166 1779 Pfam C-terminal region of Mon2 protein 1344 1405 IPR032817 -
Seca2g01166 1779 ProSiteProfiles SEC7 domain profile. 605 792 IPR000904 GO:0005085|GO:0032012
Seca2g01166 1779 FunFam Brefeldin A-inhibited guanine nucleotide-exchange protein 1 596 685 - -
Seca2g01166 1779 MobiDBLite consensus disorder prediction 1301 1334 - -
Seca2g01166 1779 Gene3D - 686 806 IPR023394 -
Seca2g01166 1779 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 213 IPR032629 -
Seca2g01166 1779 Gene3D - 592 685 - -
Seca2g01166 1779 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 64 1644 - -
Seca2g01166 1779 SUPERFAMILY Sec7 domain 609 801 IPR035999 GO:0005085|GO:0032012
Seca2g01166 1779 Pfam Domain of unknown function (DUF1981) 1163 1245 IPR015403 -
Seca2g01166 1779 Pfam Sec7 domain 613 794 IPR000904 GO:0005085|GO:0032012
Seca2g01166 1779 SUPERFAMILY ARM repeat 418 1503 IPR016024 -
Seca2g01166 1779 SMART sec7_5 609 794 IPR000904 GO:0005085|GO:0032012
Seca2g01166 1779 CDD Sec7 612 794 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01166 Seca-Chr2 18858252 18870770 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01166 K18442 - gmx:100789988 3148.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11110 4 249440622 249451363 Seca2g01166 2 18858252 18870770 PCT