Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00992 ATGAAGAAAGCATCAAACTTTGATGAAAATTGTGATGTGGGTTATCATCACCCTTCACCTTGTGTGGATCATTCAATCACTGAGACTCCTCGTTTCTCCACTATGAGTGGTGATTCTTTTGCATATTTCCGAACTTGGACAAGTTCAGAGGCATCAAATTCAAACTTCTCAGAGACTGTAGATGACAGCAGCTATGCTAGTGAACCTTCACCATCTCGGTGGACAGCTATTAAAGCTTCACCAATGAGGCTGCGGAAGCATTCAATGGATGATAAACTTGATGACAGTGATCTCTTGGATTCAGGTGAGCTTGAAATGATGAAGGAAAGATTTGCAAAGCTTCTTCTGGGAGAAGACATGTCTGGTGGTGGGAAAGGTGTTTGCACTGCAGTTACAATCTCAAATTCCATTACCAATCTCTATGCAACTGTATTTGGACAAAGTTTAAAGTTGGAGCCACTAAAGCCTGAGAAGAAGGCCATGTGGAAAAGGGAAATGAAGGTTCTTCTATCAGTGTGTGATTACATACAAGAATTTGCACCAACTGCTCAATATTTAGAAGATGGCACAATTGTGGAGATGATGAAAAGTAGGCCAAGGTCAGACATCTATATCAACCTCCCTGCATTACAGAAGCTTGACACAATGCTCATAGAAATATTAGACAGTTTTGAGGATACTGAATTTTGGTATGCAGAGAACATACCAGGGAATTCAAATCGATCACGTGCAGCCTCATTTAGAAAGATTGTTCCAAGGAAAGATGAGAAATGGTGGTTGCCAGTTCCTTGTGTTCTTCCTGGTGGCCTATCTGAGAAGTCAAGGAAGCACCTGATAGAGAAAAGGGATTGTGCTAATCAAATTCATAAAGCTGCAATGGCAATAAATAGCAATGTTCTTGCAGAAATAGATATCCCAGAAACATATATAGATGATCTTCCTAAGAATGAGTCTGCATTTTTTTCTTTTTTCCAGCTGAAATTCTATTGCCAAGTGATTGAGGATTCCATTAAATGTGATCCCATAAAGCAAATGTCTTGGAATTTATCATCAAATTTCATAAGCCTTATATGGAAGCCAATAATAGCAGCTGAGTCATGTAGAAAACGGGATGATATAATTTCATATAAGTGTGGAAGAACAAGTCTAGGGGACTCAATTTACCACTATATGTATACTGCAGACAAGTTCTCACCTGATCACCTTCTTGATTGTCTCAAAATAAGTTCTGAACATGAAGCACTTGAGCTAGCAGACAGGGTTGAATCATCAATGTACACATGGAGACGTAAAGCTTGTTTGAACCATTCAAAGTCATCATGGAAAAAAGTAAAGGATCTCATGGCTGACACTGATGGGAAGGACAAAAACTACATCTTAGCTGAGAGAGCTGAGACTTTGTTGTTTTGCCTGAAGCAAAGATATCCTGAACTTTCACAAACTTCTTTGGATACATGCAAGATCCAATACAACCGGGATGTAGGGAAAGCAGTACTAGAAAGTTATTCAAGAGTTTTAGAAGGCCTAGCATTCAACATTGTTGCTTGGATTGAAGATGTTCTTCATGTAGATAAATCAATGAAGGACCGAGATGTCTAG 1599 0.3909 MKKASNFDENCDVGYHHPSPCVDHSITETPRFSTMSGDSFAYFRTWTSSEASNSNFSETVDDSSYASEPSPSRWTAIKASPMRLRKHSMDDKLDDSDLLDSGELEMMKERFAKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQSLKLEPLKPEKKAMWKREMKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLIEILDSFEDTEFWYAENIPGNSNRSRAASFRKIVPRKDEKWWLPVPCVLPGGLSEKSRKHLIEKRDCANQIHKAAMAINSNVLAEIDIPETYIDDLPKNESAFFSFFQLKFYCQVIEDSIKCDPIKQMSWNLSSNFISLIWKPIIAAESCRKRDDIISYKCGRTSLGDSIYHYMYTADKFSPDHLLDCLKISSEHEALELADRVESSMYTWRRKACLNHSKSSWKKVKDLMADTDGKDKNYILAERAETLLFCLKQRYPELSQTSLDTCKIQYNRDVGKAVLESYSRVLEGLAFNIVAWIEDVLHVDKSMKDRDV. 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00992 532 Gene3D PRONE domain, subdomain 1 491 525 - -
Seca2g00992 532 Gene3D PRONE domain, subdomain 1 98 340 - -
Seca2g00992 532 FunFam Rop guanine nucleotide exchange factor 14 96 336 - -
Seca2g00992 532 ProSiteProfiles PRONE domain profile. 94 532 IPR005512 GO:0005085
Seca2g00992 532 MobiDBLite consensus disorder prediction 53 72 - -
Seca2g00992 532 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 51 531 IPR038937 GO:0005085
Seca2g00992 532 Gene3D PRONE domain, subdomain 2 377 490 - -
Seca2g00992 532 FunFam Rop guanine nucleotide exchange factor 2 370 490 - -
Seca2g00992 532 FunFam Rop guanine nucleotide exchange factor 14 399 532 - -
Seca2g00992 532 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 377 528 IPR005512 GO:0005085
Seca2g00992 532 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 103 320 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00992 Seca-Chr2 15920951 15924553 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00992 - - gmx:100806086 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00992 2 15920951 15924553 Seca2g00992 2 15920951 15924553 ECH
Seca4g11296 4 251520218 251523091 Seca2g00992 2 15920951 15924553 PCT