Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00977 ATGGCTATTGGTGGTTTGATTTCCAACAGAAACTTCACTTCTTTCATTGGCTCAGGAAATGGATATCAATTGGGAAAGGATCTATCACTTCAAAGAGGGGGAATTTCTGGTTTATCTGTTGCACGGTATGGTGGCCAGATTGCAAAGGATCCTTATGCAAGATGTTTTCATACCAATGCACCTTTGAGTGAGAAAGTTTCAAAACCAATACTAATGCTTCATGATGAGGTGGGGAATTGTTCTCCAGTATCACAGAAATCCATTCACTGTATGAACATGAAGCTGAAAGCCAGCAGAAGATGTCATTGCTACCATTCTTCATATCCCTATAGCCATATTAAACAAAGAGCAGTATATGGACAAGGTTTAAGCAAGCTTGGTAAGGCAAATACAGCATGTGTTCATTACAAGTCTGAGGAATATGACATTGCAGAAACAGAGGTGGATCCTCTGGCATCAACTGAAGGGACAGGTGAAACAATTCTACTGGAAGGAAATGCGCCGCAAGTATCTCCTTGGTGGCAGCGGTTTCCAAAGCGTTGGGTTATTGTATTGCTATGTTTTACAGCATTTCTGCTATGCAACATGGACCGTGTAAATATGAGCATAGCAATACTTCCAATGTCACAAGAGTTTAATTGGAACAGCGCAACAGTTGGCGTAATTCAGTCATCTTTTTTCTGGGGCTATCTACTTACTCAGATCCTTGGTGGCATATGGGCAGACAAACTTGGTGGGAAGCTAGTGCTAGGTTTTGGAGTTGTCTGGTGGTCAATGGCAACAGTTTTAACACCTATTGCTGCAAGACTTGGGCTCCCTTGTTTGCTTATTATGCGTGCCTTTATGGGGATTGGTGAGGGAGTAGCCATGCCTGCTATGAATAATATGCTGTCCAAGTGGATTCCAGTTTCAGAGAGAAGCAGATCACTTGCCTTAGTATATAGTGGCATGTACCTTGGTTCTGTGGTTGGCTTGGCTTTCTCACCTGTGCTAATCCAAAATTTTGGGTGGCCATCAGTGTTTTACTCATTTGGATCTCTTGGAAGTATCTGGTTTGTCTTGTGGTTGTCCAAAGCATATAGCTCACCAAAAGATGACCCAGATCTTGGGGTAGTGGAGAAAAGGCTCATACTTGAAGGCAGTGTATCTAAAGAACCTGTTTCAGACATTCCTTGGAAATTAATTTTATCAAAAGCACCTGTCTGGGCTCTTATAATCTCTCACTTCTGCCACAATTGGGGCACATTTATTCTATTAACCTGGATGCCTACTTACTACAATCAGGTTCTGAAGTTCAACCTTACCGAATCCGGGCTCTTTTGTGTTCTTCCATGGTTAACCATGGCTATTTTTGCAAATATTGGAGGATGGATTGCTGATACACTAGTGAGCAAAGGCCTTTCCATAACAGCTGTTCGAAAGATCATGCAATCAATCGGGTTTCTGGGTCCTGCTTTTTTCCTTACACAGCTGAGCCATGTCAAAACACCTACCATGGCAGTACTGTGCATGGCCTGCAGTCAGGGATCTGATGCATTTTCACAATCTGGTCTATATTCCAATCACCAAGACATTGGACCACGCTATGCTGGTGTATTGCTGGGACTATCAAATACTGCAGGAGTGCTTGCTGGTGTCTTTGGTACAGCTGCAACTGGATACATACTCCAACGAGGTTCTTGGAATGATGTATTTAAGGTTGCTGTTGCATTGTACATAATAGGCACATTGGTCTGGAATATCTTTGCAACTGGGGAGAAGGTTATTGACTAA 1773 0.4264 MAIGGLISNRNFTSFIGSGNGYQLGKDLSLQRGGISGLSVARYGGQIAKDPYARCFHTNAPLSEKVSKPILMLHDEVGNCSPVSQKSIHCMNMKLKASRRCHCYHSSYPYSHIKQRAVYGQGLSKLGKANTACVHYKSEEYDIAETEVDPLASTEGTGETILLEGNAPQVSPWWQRFPKRWVIVLLCFTAFLLCNMDRVNMSIAILPMSQEFNWNSATVGVIQSSFFWGYLLTQILGGIWADKLGGKLVLGFGVVWWSMATVLTPIAARLGLPCLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLALVYSGMYLGSVVGLAFSPVLIQNFGWPSVFYSFGSLGSIWFVLWLSKAYSSPKDDPDLGVVEKRLILEGSVSKEPVSDIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAIFANIGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVKTPTMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVAVALYIIGTLVWNIFATGEKVID. 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00977 590 ProSiteProfiles Major facilitator superfamily (MFS) profile. 183 587 IPR020846 GO:0022857
Seca2g00977 590 Gene3D MFS general substrate transporter like domains 178 367 IPR036259 -
Seca2g00977 590 FunFam ascorbate transporter, chloroplastic isoform X2 178 367 - -
Seca2g00977 590 SUPERFAMILY MFS general substrate transporter 168 582 IPR036259 -
Seca2g00977 590 CDD MFS_SLC17A9_like 184 583 IPR044777 -
Seca2g00977 590 Gene3D MFS general substrate transporter like domains 387 589 IPR036259 -
Seca2g00977 590 PANTHER SOLUTE CARRIER FAMILY 17 174 587 - -
Seca2g00977 590 FunFam ascorbate transporter, chloroplastic isoform X1 388 588 - -
Seca2g00977 590 Pfam Major Facilitator Superfamily 187 548 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00977 Seca-Chr2 15692355 15698272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00977 1 590 Organic Solute Cotransporters AT4G00370 73.220 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00977 K08193 - gmx:100784401 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00977 2 15692355 15698272 Seca2g00977 2 15692355 15698272 ECH
Seca4g11315 4 251670739 251677244 Seca2g00977 2 15692355 15698272 PCT