Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00962 ATGTCTGGATCAGTTTGTCTTGATGTTATCAATCAAACCTGGAGCCCCATGTTTGATCTTGTTAATGTATTTGAGGTGTTTCTACCTCAACTTCTTCTGTATCCCAATCCATCCGACCCCTTGAATGGAGAAGCTGCAGCTTTAATGATGCGTGATCGGGCTAGTTATGAACAAAGGGTTAAAGAGTACTGTGAGAAGTATGCTAAACCTGAAGACATAGGGGCAGCCCCAGAAGAGAAATCTAGTGATGAGGAGATGAGTGAAGAAGAATATGATTCTAGTGATGAACAGGTGGCTGGTAAAGCAGATCCCTAG 315 0.4286 MSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRASYEQRVKEYCEKYAKPEDIGAAPEEKSSDEEMSEEEYDSSDEQVAGKADP. 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00962 104 Gene3D Ubiquitin Conjugating Enzyme 1 81 IPR016135 -
Seca2g00962 104 MobiDBLite consensus disorder prediction 67 104 - -
Seca2g00962 104 Pfam Ubiquitin-conjugating enzyme 2 63 IPR000608 -
Seca2g00962 104 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 69 IPR000608 -
Seca2g00962 104 MobiDBLite consensus disorder prediction 67 81 - -
Seca2g00962 104 SUPERFAMILY UBC-like 2 69 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00962 Seca-Chr2 15558069 15562536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00962 K10576 - gmx:100804969 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00962 2 15558069 15562536 Seca2g00962 2 15558069 15562536 ECH
Seca4g11319 4 251720376 251723471 Seca2g00962 2 15558069 15562536 PCT