Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00946 ATGGCTGTAGAAGTGATAAAAAAGTCACCTTCTAAAGAAATATATGGCAGGGTTCAATTTGCAATAAAGGGGTTGGTGTTGATTGTGTTTTTGGGTTGGATTTTCATTTGGATAATGGCCCCTACAAACACTTACAAACAAATGTGGATGCCTCAACTAGGAGCAAAGACCACTTCTACCTATTTTGGTGCACAAGGTGGAACACTTCTTGTTTTCACTTTCCCAATTTTATTCATAGCTGTTTTGGGATGTGTCTACCTCCACATAACCAAAAAGGCAAACGATTTCAACATGGAAAGGTGCCATCATTATAGCTATGGTAAGACACATAAGGTGTCCATATGGAAGCGTCCTGTGTTTGTGAGAGGCCCTCTTGGCATAGTTTCTGGCATAGAATTAGCCTTTTTGTTCATGTTCATTGTACTCCTAGTTTGGTCCTTTTCAAGTTACTTGCAGAACGGTTTTGCCAAAATAACCCAGAAATCAGCAAAGGAACAAGGTGTAGAAGTATGGGAGAAGAAACTAGGTAGTGCAGCTACGAGGTTGGGGCTAGTTGGGAACATATGTTTGGCATTCATGTTTTTTCCAGTGACACGTGGCTCCTCAGTGTTGCCATTGCTTGGACTCACATCAGAGAGATGCATCAAGTACCATATTTGGCTTGGACACATAGCCATGACCCTCTTCACTGCTCATGGTGTTTGTTTCATCACCTATTGGGCAGTTACTGATCAACTTTGGAAGATGCTAAAATGGAAAAGGATTGGGATATCAAATGTTGCTGGAGAATTAGCATTGCTTACTGGTTTGTTCATGTGGGTTGCAACCATCCCTCGCATTAGGCGAAAAGTCTTTGAGCTCTTCTTCTACACTCATTACCTCTATATCCTCTTCATTCTCTTCTTCATCTTTCATGTGGGAATCTTACATACATGCATTATGCTCCCTGGTTTCTACCTCTTCTTAGTTGATCGTTACCTAAGGTTTTTGCAATCTACACGCCAAGTTCCTTTGGTTTCTGCTCGGGTTTTGCCTTGTGAAACTGTAGAACTCAACTTCTCTAAGAGCCATGGTTTGACTTATAATCCTACAAGTGTTATGTTCATAAATATACCAAGTATATCCAAGCTACAGTGGCATCCATTTACCATTACTTCTAATAGTAATTTGGGGCTAGAAAATCTAAGTGTTGTCATCAAAAGTGAAGGAACTTGGTCCAAGAAGCTCTACCAGATGCTTTCAACACCTTCTGCAATAGATCATCTCAATGTCTCTGTTGAAGGTCCTTATGAACCTGCATCAACCAATTATCTAAGGTATGACACTCTTGTGATGGTTAGTGGAGGGAGTGGAATCACACCCTTTATATCTATCATCCGGGAGGTAATGTATTTGAGCCTAAAATTCAGATCCAGAACCCCAAAAGTTATCCTAATTTGTGCATTCAAGAACTCTTCATGTCTCTCAATGCTAGACATGATCCTTCCATATTCTGACACCCCATGTGACATTTCTAATATGCAACTACAAATTGAAGCCTACATCACAAGACAGAAGGAGCTTAAATTGGATAGCCCAATTTACCTTCAACCCATATGGTTCAAGACCAATGAAACAGATACACCTATATCTGCTGTGTTAGGCCCAAACAGTTGGCTATGGCTTTGTGCTATAATCTCATCCTCATTCATAATTTTCCTTATCTTAATTGGGGTCATCACCCATTACTTCATTTTCCCTATAGATCATAATTCTAACAAAATATTTTCATACCCTTTGAGGTCTTTCCTCAACATGTTAGTAATATGTGTGTCCATAGCCATGGCTGCTAGTGTTGCTGTTCTTTGGAACAAGAAACACAATGACAAAGAAGAAAAGCAGATTCAGAACATGGAAGGGTCATCATCAGCAGTGTCTCCAAAGTTAAAGATTGATGAAAGAGATAGAGAATTGGAAAGCCTCCCACGCCAATCCCTTGCTCAAGCTACAAACGTGCATTATGGTGTAAGACCTGATCTAAGAAAACTGCTATTTGAACTGAAGGGGCCAAGTGTAGGAGTTTTTGTTTCTGGACCCAAGAAGATGAAGCAGGAGGTTGCAGCCATTTGCTCATCTGATTTAGCTAAAAATCTGCATTTTGAATCCTTTAGCTTTAGTTGGTGA 2163 0.4008 MAVEVIKKSPSKEIYGRVQFAIKGLVLIVFLGWIFIWIMAPTNTYKQMWMPQLGAKTTSTYFGAQGGTLLVFTFPILFIAVLGCVYLHITKKANDFNMERCHHYSYGKTHKVSIWKRPVFVRGPLGIVSGIELAFLFMFIVLLVWSFSSYLQNGFAKITQKSAKEQGVEVWEKKLGSAATRLGLVGNICLAFMFFPVTRGSSVLPLLGLTSERCIKYHIWLGHIAMTLFTAHGVCFITYWAVTDQLWKMLKWKRIGISNVAGELALLTGLFMWVATIPRIRRKVFELFFYTHYLYILFILFFIFHVGILHTCIMLPGFYLFLVDRYLRFLQSTRQVPLVSARVLPCETVELNFSKSHGLTYNPTSVMFINIPSISKLQWHPFTITSNSNLGLENLSVVIKSEGTWSKKLYQMLSTPSAIDHLNVSVEGPYEPASTNYLRYDTLVMVSGGSGITPFISIIREVMYLSLKFRSRTPKVILICAFKNSSCLSMLDMILPYSDTPCDISNMQLQIEAYITRQKELKLDSPIYLQPIWFKTNETDTPISAVLGPNSWLWLCAIISSSFIIFLILIGVITHYFIFPIDHNSNKIFSYPLRSFLNMLVICVSIAMAASVAVLWNKKHNDKEEKQIQNMEGSSSAVSPKLKIDERDRELESLPRQSLAQATNVHYGVRPDLRKLLFELKGPSVGVFVSGPKKMKQEVAAICSSDLAKNLHFESFSFSW. 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00946 720 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 440 716 IPR039261 -
Seca2g00946 720 Pfam FAD-binding domain 335 433 IPR013112 GO:0016491
Seca2g00946 720 Pfam Ferric reductase NAD binding domain 440 704 IPR013121 GO:0016491
Seca2g00946 720 Gene3D - 604 719 IPR039261 -
Seca2g00946 720 Gene3D - 424 548 IPR039261 -
Seca2g00946 720 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 331 436 IPR017927 GO:0016491
Seca2g00946 720 CDD NOX_Duox_like_FAD_NADP 338 517 - -
Seca2g00946 720 SFLD Ferric reductase subgroup (FRE) 16 720 - -
Seca2g00946 720 PANTHER NADPH OXIDASE 28 718 - -
Seca2g00946 720 Pfam Ferric reductase like transmembrane component 182 302 IPR013130 -
Seca2g00946 720 SFLD Ferric Reductase Domain 41 720 - -
Seca2g00946 720 FunFam Ferric reduction oxidase 3 429 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00946 Seca-Chr2 15240283 15245453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00946 9 720 Miscellaneous Gene Families AT1G01580 54.722 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00946 K00521 - gmx:100814642 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11340 4 251985276 251989516 Seca2g00946 2 15240283 15245453 PCT