Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00943 ATGTCCATAATGAACAACAATCTCAAAGATTCAGAACACTTTTACTCTTCATGGACCATAACAAAGCTTGTGACTTTCTTCTTCCTCTTAATCTCCTTCTTCTACCTCTCCTACTCCCTTGGATTTCTTACTCATTCTTCATATGATTGTAACCAAAAGCCTAATTACCTTCCAATTACCCACCTATTTAACACTGCCCCTCTCCCATCTCAAAAACCCTTTGAAAAAACCAACATTTCCCACATAGTGTTTGGCATAGGAGCCTCATCCAAGCTATGGAATCAAAGGAAAGAGTACATCAAGCTATGGTGGAGGCCCAATGAAACAAGGGGCAATGTGTGGTTAGACCAAGATGTGCAAACTGAGCCTGGGGATGAAGATCTCCTTCCAAAATTGAAGATTTCTGGTGACACTTCCATGTTTATGTACAAACACCCAAATGGGAACAGAGATGGAATTCGCATATCTCGCATAGTGTCAGAGACAGTGAGGCTTGAGATGGAGAATGTGAGGTGGTTTGTGATGGGGGATGATGACACTTTCTTTGTGACAGAGAATTTGGTTAAGGTGTTGCAAAAGTATGATCATAACAAATTCTATTACATTGGGACAACTTCAGAGAGCCACTTTCAAAACATACATTTTTCTTATAATATGGCTTTTGGGGGTGGTGGGTTTGCTATTAGTTACCCATTGGCTGTGGTATTGGAGAGAATGCAAGATAGGTGCATCCAGAGGTACCCTGCATTGTATGGCTCTGATGATAGGATTCAAGCTTGTATGGCAGAGCTTGGTGTTCCACTTACCAAGGAGAATGGCTTTCATCAGTTTGATGTACATGGCAATGTATTTGGGCTCCTAGCAGCCCATCCCATTACACCACTTGTGTCCATGCATCACTTGGACCTAGTTGAGCCTATATTTCCAAACATGAGCCGGATCCAAGCCCTTCAACGACTCAAAGACCCAATGAAATTCGACCCGTATGGGCTTATGCAACAATCGATTTGCTATGACAAAACCCGGGTTTGGACTATATCCGTGTCTTGGGGCTATGCGGTTCAAATATTCCGAAGCATTTTCTCGGCCCGAGATATGGAGATGCCCGCGAGAACCTTTTTCAATTGGTATCGCCGGGCTGATTATACTGGATTTCCATTTAACACGCGCCCGTTCAGCCGAAACTCTTGTCAGAAACCTTTTGTTTTTTACTTGTTTAATACAACATATGATGTTACTACTAATGAAATTGTAACCAAGTATCTTAGGATCCACCAAAACCCGAATTGCAAGTGGAAAATGCCGGATCCTACCCAAATCCAAATTGTGGAGGTTCATAAGAAACCCGACCCGCATTTGTGGGAAAAGTCTCCAAGAAGAAATTGTTGCAGGCTTCAACCTACAAAGGAGGAAGGAACTTTGGTGATTGATGTAGGGGAATGCAGTGAAGATGAAGTCGTTGAATAG 1467 0.4254 MSIMNNNLKDSEHFYSSWTITKLVTFFFLLISFFYLSYSLGFLTHSSYDCNQKPNYLPITHLFNTAPLPSQKPFEKTNISHIVFGIGASSKLWNQRKEYIKLWWRPNETRGNVWLDQDVQTEPGDEDLLPKLKISGDTSMFMYKHPNGNRDGIRISRIVSETVRLEMENVRWFVMGDDDTFFVTENLVKVLQKYDHNKFYYIGTTSESHFQNIHFSYNMAFGGGGFAISYPLAVVLERMQDRCIQRYPALYGSDDRIQACMAELGVPLTKENGFHQFDVHGNVFGLLAAHPITPLVSMHHLDLVEPIFPNMSRIQALQRLKDPMKFDPYGLMQQSICYDKTRVWTISVSWGYAVQIFRSIFSARDMEMPARTFFNWYRRADYTGFPFNTRPFSRNSCQKPFVFYLFNTTYDVTTNEIVTKYLRIHQNPNCKWKMPDPTQIQIVEVHKKPDPHLWEKSPRRNCCRLQPTKEEGTLVIDVGECSEDEVVE. 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00943 488 Gene3D - 69 337 - -
Seca2g00943 488 FunFam Fringe-related protein-like 69 325 - -
Seca2g00943 488 PANTHER FRINGE-RELATED 22 487 - -
Seca2g00943 488 Pfam Protein of unknown function, DUF604 211 463 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00943 Seca-Chr2 15194464 15200773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00943 18 488 Glycosyltransferase AT4G23490 58.800 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00943 - - gmx:100777888 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00943 2 15194464 15200773 Seca2g00943 2 15194464 15200773 ECH
Seca4g11342 4 252009034 252013665 Seca2g00943 2 15194464 15200773 PCT