Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00739 ATGGCTACCATGAACCCTTTTGATTTGTTGGGCGATGATGCTGAGGACCCTTCTCAGCTCATCGCCGCCGAGCAGCTCAAGGCGGCGGCCGCGCCGAAGAAGACGGCGGCTCAGGAGCAGGGCAAGCAGCGACCCGGTCAGACTCAGCAGAGCAAGCCTGCTCAGCTGCCTTCCAAGCCTCCTCCTCCATCTCAGGCTGTGAGGGAGGCCAGGAATGAAACATCTCGAGGAGGCCGTGGAGGTGGACGAGGAGGTGGTCGTGGATATGGGCGTGGTCGTGGCTTTAATCGTGACTCTTCCAATGATGAGAATTCATTCCCTGCCAGTGGAGCTGCTGATAGTCAGGGTCCTTTTGAAGAGGGAGATGCTGGGAAGGCTTCAGAAAGGCGTGGTTATGGTGGACCACGAGGTCCTTACCGTGGCGGTCGTCGTGGAGGTTTCAGCAATGGTGAAGCTGGTGAAGAAGGACGACCTCGAAGAGCATTTGAACGCCGCAGTGGGACTGGGCGAGGAAATGAATTCAAACGTGAAGGTGCTGGACGAGGTAACTGGGGAACACCAACTGATGAAATAACTCAGGTGACTGATGAAGTCGTGAATGAAGCTGAAAAGAATCTGGGTGATGAGAAGCCTGCAGCTGAAGATGTAGCTGATGGAAACAAGGAGAGTCCTGCTAATGAAACTGAAGAAAAAGAGCCTGAAGATAAGGAAATGACTCTGGAGGAATATGAGAAAGTGCTGGAAGAAAGAAGGAAGGCCCTTCAAGCACTCAAGACTGAAGAGAGGAAGGTAGACACTAAAGCGTTTGAATCCATGCAGCCCTTATCAAGCAAGAAAGAAAATAATGACATTTTCATTAAATTGGGGTCTGATAAGGATAAGCGCAAAGAGGCTTTTGAGAAGGAAGAGAAATCTAAGAAGGTCTGA 927 0.5113 MATMNPFDLLGDDAEDPSQLIAAEQLKAAAAPKKTAAQEQGKQRPGQTQQSKPAQLPSKPPPPSQAVREARNETSRGGRGGGRGGGRGYGRGRGFNRDSSNDENSFPASGAADSQGPFEEGDAGKASERRGYGGPRGPYRGGRRGGFSNGEAGEEGRPRRAFERRSGTGRGNEFKREGAGRGNWGTPTDEITQVTDEVVNEAEKNLGDEKPAAEDVADGNKESPANETEEKEPEDKEMTLEEYEKVLEERRKALQALKTEERKVDTKAFESMQPLSSKKENNDIFIKLGSDKDKRKEAFEKEEKSKKV. 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00739 308 MobiDBLite consensus disorder prediction 1 20 - -
Seca2g00739 308 MobiDBLite consensus disorder prediction 25 240 - -
Seca2g00739 308 Coils Coil 240 263 - -
Seca2g00739 308 Pfam Hyaluronan / mRNA binding family 158 264 IPR006861 -
Seca2g00739 308 Pfam Stm1 1 81 IPR019084 -
Seca2g00739 308 Gene3D - 156 268 - -
Seca2g00739 308 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 307 IPR039764 GO:0003723
Seca2g00739 308 MobiDBLite consensus disorder prediction 153 177 - -
Seca2g00739 308 MobiDBLite consensus disorder prediction 201 240 - -
Seca2g00739 308 MobiDBLite consensus disorder prediction 284 308 - -
Seca2g00739 308 MobiDBLite consensus disorder prediction 261 308 - -
Seca2g00739 308 SMART HABP4_PAI_RBP1_2 158 265 IPR006861 -
Seca2g00739 308 MobiDBLite consensus disorder prediction 40 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00739 Seca-Chr2 11373129 11377302 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00739 K13199 - gmx:100814825 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00739 2 11373129 11377302 Seca2g00739 2 11373129 11377302 ECH
Seca4g10181 4 236111027 236115837 Seca2g00739 2 11373129 11377302 PCT