Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00734 ATGAGGCCTTCCCCAAGAACACTACGCCCACCTCCAACCAACACCCCACACACTCTCAAACCACGTTGCATAACCCTCACCCAACCACCTAAACCCGCCAAGAACTTACACCTATCCGATGACACTCGACAAGCCGCATTACACTTAGAAAAAATGATAAATTTAGAACACCATCATAATTTTCCACCCTTAAACTCACCATCACCACATTCTTCTTTGGGACTAAAACAAGAGAAACTTGGGAAAAGGTGGAAGGAGTATCAAGGGATGAGGAATTGGGAGGGTTTGCTTGACCCATTGGATGAAAATCTACGCGCTGAAATCCTACGCTATGGTCATTTCGTAGAAGCTGCTTATAAGTCCTTTGAGTTTGACCCTTCTTCCACTAATTATGCAAATTGTAGGTTCCCAAAGAGCACACTTTTCGAACGGTGTGGTTTACCTAACACTGGCTACAAGGTAACCAAACACCTACGTGCAACCTCAGGGATTCAACTACCTAGTTGGGTAGACAAAGCACCAACTTGGGTTGGGACACAATCTAGCTACGTTGGCTACGTTGCAGTTTGTGACAACAAGGAAGAGATCAAAAGGCTTGGTCGGCGTGATATCATTGTTGCATATAGAGGAACCACCACATGTTTAGAATGGCTCGAGAATTTCCGTGCCACTCTCACCCACCTCCCAATTCCATCATTCCCATGCAACAACAATTGTGGGGCCATGGTGGAAAGTGGATTTTTAAGCCTCTACACATCATCACACTCCACAAACCAATCATCTATGAGTTTGCAAGAAATGGTAAGACAAGAGATTGAAAGGATTCTCCAAACATATGAAGGGGAACCACTCAGCCTGACCGTTACCGGCCACAGTCTCGGAGCAGCTTTAGCCACCTTAACGGCTTATGATTTCAAGACGGTTGCTCCAAGATTACCGGTGACGGTCATTTCTTTCGGCGGTCCCCGTTGGGGACCGGAGCTTTCGGCGGAACCTTGA 999 0.4645 MRPSPRTLRPPPTNTPHTLKPRCITLTQPPKPAKNLHLSDDTRQAALHLEKMINLEHHHNFPPLNSPSPHSSLGLKQEKLGKRWKEYQGMRNWEGLLDPLDENLRAEILRYGHFVEAAYKSFEFDPSSTNYANCRFPKSTLFERCGLPNTGYKVTKHLRATSGIQLPSWVDKAPTWVGTQSSYVGYVAVCDNKEEIKRLGRRDIIVAYRGTTTCLEWLENFRATLTHLPIPSFPCNNNCGAMVESGFLSLYTSSHSTNQSSMSLQEMVRQEIERILQTYEGEPLSLTVTGHSLGAALATLTAYDFKTVAPRLPVTVISFGGPRWGPELSAEP. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00734 332 Gene3D alpha/beta hydrolase 83 331 IPR029058 -
Seca2g00734 332 MobiDBLite consensus disorder prediction 1 17 - -
Seca2g00734 332 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 50 325 - -
Seca2g00734 332 CDD Lipase_3 160 323 - -
Seca2g00734 332 Pfam Lipase (class 3) 205 325 IPR002921 GO:0006629
Seca2g00734 332 MobiDBLite consensus disorder prediction 1 23 - -
Seca2g00734 332 SUPERFAMILY alpha/beta-Hydrolases 105 328 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00734 Seca-Chr2 11056213 11057211 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00734 55 325 Acyl Lipid Metabolism Gene Families AT2G44810 64.000 1.76e-121 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00734 K16818 - gmx:100800549 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00734 2 11056213 11057211 Seca2g00734 2 11056213 11057211 ECH
Seca4g10176 4 235978030 235979364 Seca2g00734 2 11056213 11057211 PCT