Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00268 ATGTCATGTTTTTTTTTGCTTTGCAGGGTCACTGTGGATAGCACTTCAAGCAGAACAGCCACTTTGATAAAGGTTGATAGCGCAAATAAGCGTGGGAGTTTGTTGGAAGTGGTTCAGGTTCTTACTGATATGAATCTCATTGTGAGAAGAGCTTACATTTCCTCTGATGGAGAATGGTTCATGGATGTTTTTCATGTTACAAATCAAAATGGGGAAAAGTGTCTTCAAGAAGATGCAGCTGACCGCATTCAACAGTCATTGGGTCCAAGAGCCCGTAGTTTCAGATCCTTGAGAAGTTCTGTTGGGGTCCAAGCTGCTGCTGAACACACAGCAATTGAGTTAACTGGAAGAGATAGGCCAGGATTGCTTTCAGAAGTTTTTGCTGTTCTTGCAGACCTCAAATGCAATGTGGTAGCAGCAGAAGTGTGGACCCACAATTCAAGAATGGCATCTGTTGTTTACATCACTGATGAGGAAAGAGGTTTGTCAATAGACAATCCTGATCGCCTTGCTAAGATTAAGCAGCTTTTGCTATATGTGTTGAAAGGAGACATAGATAAGAAGAGTGCCAACACTGCTGTTTCTGTTGGTTCTACTCACAAGGAAAGGAGATTGCATCAATTGATGTATGCTGATCGTGATTATGACATATATGATGGAGATTATGAGCCAACAAGTGATAGGAGCAAGCTTCTTGTAACTGTTGATGATTGCATAGACAAGGGATATACTGTTGTGAACTTGAGGTGTCCAGACAGACCAAAGTTACTATTTGATACTGTGTGCACACTCACAGATATGCAGTATGTTGTTTACCATGGCACTGTCATTGCTGAAGGACCAGAAGCATGTCAGGAATATTATATAAGGCATGTGGATGGATGTCCTATCAGTTCTGAAGCAGAAAGGCAAAGAGTGATTCATTGCTTGGAGGCTGCTATTAGGAGACGAAGTTCTGAGGGTATAAAGCTAGAACTCTGTGGTGATGACAGAATTGGCCTTCTATCAGATGTAACTCGCATCTTTAGAGAAAATGGCCTTTCAGTTAACCGTGCTGAGGTTACAACAAGGGGTTCACAAGCCATGAATGTTTTCTATGTGACTGATGTATCTGGGAATGAAGTTAAGAGTGAAACTATTGAGGCAGTTCGAAAAGAGATTGGATTGACCATACTGCGTGTCAAAGATGATGTGTGCTCAAAATCTCCATCACAAGAGAGTGGGAAATTCTCTTTCTGTGATCTCTTTAGATCAGGCTCTGAGAAGTTTCTTTACAATTTGGGTCTGATGAAGTCTTGTTCCTAA 1305 0.4138 MSCFFLLCRVTVDSTSSRTATLIKVDSANKRGSLLEVVQVLTDMNLIVRRAYISSDGEWFMDVFHVTNQNGEKCLQEDAADRIQQSLGPRARSFRSLRSSVGVQAAAEHTAIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEERGLSIDNPDRLAKIKQLLLYVLKGDIDKKSANTAVSVGSTHKERRLHQLMYADRDYDIYDGDYEPTSDRSKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEACQEYYIRHVDGCPISSEAERQRVIHCLEAAIRRRSSEGIKLELCGDDRIGLLSDVTRIFRENGLSVNRAEVTTRGSQAMNVFYVTDVSGNEVKSETIEAVRKEIGLTILRVKDDVCSKSPSQESGKFSFCDLFRSGSEKFLYNLGLMKSCS. 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00268 434 SUPERFAMILY ACT-like 18 89 IPR045865 -
Seca2g00268 434 CDD ACT_ACR_4 321 392 - -
Seca2g00268 434 Gene3D - 109 180 - -
Seca2g00268 434 SUPERFAMILY ACT-like 319 388 IPR045865 -
Seca2g00268 434 ProSiteProfiles ACT domain profile. 111 188 IPR002912 -
Seca2g00268 434 ProSiteProfiles ACT domain profile. 323 401 IPR002912 -
Seca2g00268 434 Pfam ACT domain 327 382 IPR002912 -
Seca2g00268 434 Pfam ACT domain 111 160 IPR002912 -
Seca2g00268 434 SUPERFAMILY ACT-like 108 177 IPR045865 -
Seca2g00268 434 CDD ACT_ACR_2 110 183 - -
Seca2g00268 434 Gene3D - 321 395 - -
Seca2g00268 434 ProSiteProfiles ACT domain profile. 22 102 IPR002912 -
Seca2g00268 434 CDD ACT_ACR_3 243 317 - -
Seca2g00268 434 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 8 395 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00268 Seca-Chr2 3788381 3791670 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00268 - - gmx:100816426 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00268 2 3788381 3791670 Seca2g00268 2 3788381 3791670 ECH
Seca2g00268 2 3788381 3791670 Seca12g01879 12 21802081 21805774 ECH