Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06995 ATGATTACTTTAACAGATTTCTATCATGTCATGACCGCAATGGTGCCACTTTACGTGGCTATGATATTAGCCTATGGTTCTGTGAAATGGTGGAAAATCTTCTCCCCTGACCAATGCTCTGGCATCAACCGCTTTGTTGCTCTGTTTGCAGTTCCTCTCCTTTCTTTCCATTTCATCGCTTCTAACAACCCTTACCAAATGAACTTGCGCTTCATCGCTGCTGACACACTTCAAAAGATCATTGTCTTAGTTGTTCTTGCTATTTGGACCAACGTGAGCAAAAGGGGTTGCTTGGAATGGACAATAACCCTCTTCTCCATTTCTACCCTTCCAAACACGTTGGTTATGGGTATCCCTTTGCTCAAAGGGATGTATGGTGAGTTCTCAGGGAGTTTAATGGTCCAAATTGTGGTCCTCCAATGCATCATTTGGTACACCTTGATGCTGTTCATGTTTGAGTACAGAGGAGCCAGAATGCTTATCTCTGAGCAATTTCCAGACACTGCTGGTACCATTGTCTCCATTCATGTTGATTCTGACGTCATGTCATTGGATGGAAGACAACCCTTAGAAACTGAAGCTGAAATCAAAGAAGATGGGAAGCTTCATGTCACTGTAAGAAAGTCCAATGCTTCAAGATCCGATATTTTCTCAAGAAGGTCTCAAGGGCTTTCCTCCACAACCCCTCGCCCTTCTAACCTCACAAATGCAGAGATATACTCTTTACAATCCTCTAGGAACCCAACTCCAAGAGGGTCTAGTTTCAACCACACGGATTTCTATTCCATGATGGGTGGTGGTAGAAATTCCAACTTTGGTGCATCTGATGTTTATGGACTCTCAGCATCAAGAGGACCAACACCAAGGCCTTCTAATTATGATGAAGATGGTGGCAATAAGGCAAGGTACCATAACCATTACCATGCTGGTTCTGGTGGAACAGGGCACTACCCTGCACCTAATACTGGGATGTTCTCTCCCACTGCTTCCAAAAATGTTGCTGCTAATGGAAATGCCAAGAAGCCTAATGGTCAAGTTCAGAAACCAGAGGATGGGAATAAGGACCTTCATATGTTTGTTTGGAGTTCAAGTGCTTCCCCTGTCTCTGACGTGTTTGGTGCCCATGAATATGGAGTTCATGATCAGAAAGAAGTTAAATTGAATGTCTCTCCTGGAAAAGTGGAGGGTCATAGAGACAGTACTCAAGAGGAGTACCTAGAGAAAGATGATTTCAGTTTTGGAAACAGGGGAATAGAGAATCATCATGAAGCTGAGAAAGTTGGAAACGGCAAGGCAAAAGTTATGCCTCCAGCGAGTGTGATGACAAGGCTGATATTGATCATGGTGTGGAGAAAACTTATCCGAAACCCCAACACTTACTCAAGCCTACTCGGCCTAACTTGGTCACTTGTTTCATTCAGGTGGAATATTGAAATGCCTGCCATCATAGCAAAGTCTATTTCCATATTGTCAGATGCAGGGCTTGGCATGGCCATGTTCAGTCTTGGTTTGTTCATGGCCTTGCAACCAAGGATCATAGCATGTGGAAATTCCGTAGCAGCTTTTTCTATGGCCGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCGGCTTCCATTGCTGTTGGACTCAGAGGCGTTCTCTTACATGTTGCCATTGTTCAGGTTTCTCTGCTCTGCTCCCTTCTAACACAACCAATACAATATTCAATTACATAA 1719 0.4392 MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYQMNLRFIAADTLQKIIVLVVLAIWTNVSKRGCLEWTITLFSISTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLISEQFPDTAGTIVSIHVDSDVMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMGGGRNSNFGASDVYGLSASRGPTPRPSNYDEDGGNKARYHNHYHAGSGGTGHYPAPNTGMFSPTASKNVAANGNAKKPNGQVQKPEDGNKDLHMFVWSSSASPVSDVFGAHEYGVHDQKEVKLNVSPGKVEGHRDSTQEEYLEKDDFSFGNRGIENHHEAEKVGNGKAKVMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLTWSLVSFRWNIEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSVAAFSMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQVSLLCSLLTQPIQYSIT. 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06995 572 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 558 - -
Seca12g06995 572 NCBIfam auxin efflux carrier 1 558 IPR014024 -
Seca12g06995 572 Pfam Membrane transport protein 9 558 IPR004776 GO:0016020|GO:0055085
Seca12g06995 572 MobiDBLite consensus disorder prediction 213 235 - -
Seca12g06995 572 MobiDBLite consensus disorder prediction 277 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06995 Seca-Chr12 161915817 161919681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06995 1 558 Organic Solute Cotransporters AT1G73590 71.088 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06995 K13947 - gmx:100499637 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06995 12 161915817 161919681 Seca12g06995 12 161915817 161919681 ECH
Seca12g06995 12 161915817 161919681 Seca10g04753 10 109173816 109177259 PCT