Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04753 ATGATCACATTAACAGACTTCTACCATGTGATGACTGCAATGGTGCCACTTTATGTGGCTATGATATTAGCCTATGGCTCAGTGAAATGGTGGAAAATCTTCTCCCCTGATCAATGCTCTGGCATCAACCGTTTTGTGGCACTTTTTGCTGTTCCTCTCCTTTCTTTCCATTTCATAGCCTCTAATAATCCTTACCAAATGAACCTTCGCTTCCTTGCTGCTGATACCCTTCAAAAGATCATAGTTTTGGTTGTTTTAGCTATTTGGAGCAACTTCACCAAAAGGGGTTGTTTGGAATGGACCATAACCTTGTTCTCTCTTTCTACCCTCCCAAACACTTTGGTTATGGGTATCCCTTTGCTTAAAGGGATGTATGGTGAGTTCTCAGGGAGCCTAATGGTTCAAATTGTGGTTCTTCAGTGTATCATTTGGTACACTTTGATGCTCTTCATGTTTGAGTTCAGGGGAGCTAGAATGCTGATTTCTGAACAGTTCCCTGACACTGCTGGTTCCATTGTCTCCATTCATGTGGACTCTGATGTTATGTCATTGGATGGAAGACAACCATTGGAAACTGAAGCTGAGATTAAAGAAGATGGGAAGCTTCATGTTACTGTGAGGAAATCCAATGCTTCAAGATCAGATATTTTTTCAAGAAGGTCTCAAGGTCTTTCTTCAACAACTCCTCGCCCTTCAAACCTTACCAATGCTGAGATATACTCTTTGCAGTCTTCTAGGAACCCCACACCAAGAGGTTCTAGTTTCAATCACACAGATTTCTATTCAATGATGGCTGGTGGAAGAAATTCCAACTTTGGTGCTTCTGATGTTTATGGTCTTTCAGCATCAAGAGGACCAACTCCAAGGCCTTCTAACTATGATGAAGATGGTTCTAAGCCAAAGTACCATTACCATGGTGGACCTGGTGGAACTGGTCACTACCCTGCACCAAATCCAGGGATGTTCTCTCCCACTACTGGGTCCAAAACTGTTGCTGCTAATGCTAATGCTAATGCCAAGAGGCCTAATGGTCAAGCACAGCAGAAACCTGAGGATGGGAATAGGGACCTTCATATGTTTGTTTGGAGTTCAAGTGCTTCTCCAGTTTCTGATGTGTTTGGTGGCCATGAATTTGGAGTTCATGATCAGAAAGAAGTCAAATTGAATGTGTCTCCAGGAAAAGTGGAGGGTCATAGAGACACTCAAGAGGACTACCTAGATAAAGATGAATTCAGCTTTGGAAATAGAGGAATAGATAGGGAAATGAATCAAAATGAAGGTGAGAAAGTTGGAGATGGGAAACCAAAAACTATGCCTCCAGCAAGTGTGATGACAAGGCTTATATTGATTATGGTGTGGAGAAAACTTATCAGAAACCCCAACACCTACTCTAGTTTATTTGGACTCACTTGGTCTCTTATTTCATTCAAGTGGAATGTTGAGATGCCTGCCATAATAGCAAAGTCTATTTCCATACTGTCAGATGCAGGGCTTGGCATGGCCATGTTCAGTCTTGGTCTGTTCATGGCTTTGCAACCAAGGATCATAGCATGTGGAAATTCCATAGCAACTTTTGCTATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGACTCAAAGGTGTTCTCTTACATGTTGCCATTGTTCAGGTAGTAGTATTCTTTTCTTTCTCTCTCTCTTCTGCTCTGCTCCCTAGCCAATACAATATTCATTGCATAAACTCCAAAAATTCCTTTACTTTTAAAATTATTATTAATAACTATATGTCTAGCTCTGCCAATATAAACTATTTTATTCATTTCTATTTTTTTTTTTTAAAAAGTTTATCTCATTTTCCAAAGTAA 1869 0.4072 MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYQMNLRFLAADTLQKIIVLVVLAIWSNFTKRGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARMLISEQFPDTAGSIVSIHVDSDVMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMAGGRNSNFGASDVYGLSASRGPTPRPSNYDEDGSKPKYHYHGGPGGTGHYPAPNPGMFSPTTGSKTVAANANANAKRPNGQAQQKPEDGNRDLHMFVWSSSASPVSDVFGGHEFGVHDQKEVKLNVSPGKVEGHRDTQEDYLDKDEFSFGNRGIDREMNQNEGEKVGDGKPKTMPPASVMTRLILIMVWRKLIRNPNTYSSLFGLTWSLISFKWNVEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIATFAMAVRFLTGPAVMAAASIAVGLKGVLLHVAIVQVVVFFSFSLSSALLPSQYNIHCINSKNSFTFKIIINNYMSSSANINYFIHFYFFFLKSLSHFPK. 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04753 622 MobiDBLite consensus disorder prediction 279 329 - -
Seca10g04753 622 Pfam Membrane transport protein 9 579 IPR004776 GO:0016020|GO:0055085
Seca10g04753 622 MobiDBLite consensus disorder prediction 213 235 - -
Seca10g04753 622 MobiDBLite consensus disorder prediction 413 433 - -
Seca10g04753 622 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 580 - -
Seca10g04753 622 NCBIfam auxin efflux carrier 1 593 IPR014024 -
Seca10g04753 622 MobiDBLite consensus disorder prediction 413 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04753 Seca-Chr10 109173816 109177259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04753 1 579 Organic Solute Cotransporters AT1G73590 70.521 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04753 K13947 - gmx:100499637 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06995 12 161915817 161919681 Seca10g04753 10 109173816 109177259 PCT