Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06286 ATGGATCTTTTGCTGGTTCCTTACTCATTGGGTCCTAGTCTCAAAATAATTCAGTGGCCACCATTTTTGCTTGCAAGCAAGATTCCTGTAGCACTGGATATGGCAACTCAGTTTCGAGGGAGGGACTCTGATCTTTGGAGGCGCATATGTGCAGATGAATATATGAAATGCGCTGTGATTGAATGCTATGAATCTTTTAAACATGTTCTACATGATTTAGTGATAGGAGAGACTGAAAAAAGGATAATTTCCACAATAATTAAAGAAGTTGAGAGCAACATGTCAAAGAACACACTTATTACAAATTTCCGAATGGGCTTTTTACCCTCCCTTTGCAAAAAGTTTGTGGAGCTTGTGGAAATCTTGAAAGATGCAGATCCATCCAAGCGAGGTACAGTGGTGGTCTTGCTGCAAGACATGTTAGAAGTGGTTACTGATATGATGGTGAATGAAATTAGTGAATTGGCAGAACTTAATCAAAGTAGTAAGGATACTGGACAGCAAGTTTTTGCTGGTACTGAGGCAAAACCTGCTATAGTATTCCCTCCTGTTATTACAGCACAATGGGAGGAACAGATAAGACGTCTTTACCTACTCTTGACAGTGAAGGAATCAGCCATTGAGGTTCCAACAAACAGTGAAGTACGCAGAAGGATTGCATTCTTTACCAATTCATTATTCATGGATATGCCACGTGCTCCCCGAGTCCGTAAAATGCTCTCATTCAGTGTCCTAACTCCATACTACAGTGAAGAGACTGTATATTCTAAGAATGATATTGAGGTTGAGAACGAAGATGGTGTGTCAATCATATATTATCTGCAAAAGATCTTCCCTGATGAATGGAATAACTTCATGGAACGACTTGATTGTAAGAAAGATAGTGAGATCTGGGAGAAAGAGGAGAATATATTACAGCTACGTCACTGGGCCTCATTAAGAGGACAAACTCTTTGCAGGACAGTTAGGGGAATGATGTACTACCGGCGGGCATTAAAGCTTCAGGCATTTCTTGATATGGCTAGTGAAAAAGAGATACTCAATGGATATAAAGCTATTACAATTCCATCTGAGGAAGATAAAAAGAGTCAGAGATCCCTATATGCCAATTTAGAGGCTATGGCTGACATGAAATTCACATACGTTGCTACCTGTCAGAACTATGGGAATCAGAAGCGTAGCGGAGACCGCCGTGCAACAGATATCCTGAATCTGATGGTTAACAATCCCTCACTTCGTGTTGCATATATTGATGAAGTTGAAGAAAGAGAAGGTGGAAAAGTACAGAAAGTTTATTATTCTGTATTGATCAAAGCTGTGGACAATCTTGACCAAGAAATATATCGAATAAAACTTCCGGGTCCGGCAAAATTAGGAGAAGGAAAGCCTGAAAATCAAAATCATGCCATCATTTTTACTAGGGGGGAAGCTCTTCAAGCAATCGACATGAACCAGGACAATTACTTGGAAGAAGCTTTAAAAATGCGTAATCTTCTGGAAGAATTCAGTGAGGATCATGGAGTGCGCCCACCTACCATACTAGGTGTTCGTGAGCATATCTTTACTGGAAGTGTCTCTTCATTGGCTTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCGCTGAAGGTTCGATTCCACTATGGTCATCCGGATGTTTTTGATAGAATTTTCCATTTTACTCGTGGAGGAATCAGCAAGGCATCTCGTGGCATCAATCTGAGCGAGGATATATTTGCTGGATTCAACTCAATACTAAGACGTGGGAATGTTACTCATCATGAATATATCCAAGTTGGAAAGGGTAGAGATGTAGGGCTCAATCAAATCTCTCTTTTTGAAGCTAAAGTAGCCTGTGGTAATGGAGAGCAGACAATAAGCAGGGATATCTACCGGCTGGGGCATCGATTTGACTTTTTCCGCATGCTATCGTTTTATTTTACAACCGTTGGATTTTATATCAGCTCAATGTTAGTGGTCATCACGGTTTATGCTTTCCTATATGGCAAACTTTACCTGTCAGTGAGTGGACTTGAGGCAGCTATAGTTAAGTTTGCAAGAAGAAAGGGTGACAATGCATTAAAGGCAGCAATGGCTTCACAATCCCTTGTTCAAATTGGTCTTCTGATGACTCTGCCCATGGTCATGGAAATTGGACTAGAGAGAGGGTTCAGAACTGCTTTAGGTGACATCATAATAATGCAGCTACAGTTAGCACCCGTTTTCTTCACTTTCTCACTAGGGACGAAGTTGCACTACTTTGGGCGCACTCTCCTGCATGGAGGGGCAAAGTACAGAGCAACTGGTCGTGGTTTTGTAGTTCGTCATGAGAAGTTTGCGGAAAATTACAGAATGTACTCTAGGAGTCACTTTGTAAAAGGGTTAGAGCTAGCTATACTGCTTATATGTTACAGGCTTTATGGAACAGCAGCTCCTGATTCGATAGGATATGGCCTTCTCTCATGGTCCATGTGGTTTTTGGTGTGTTCTTGGTTGTTTAGTCCTTTCCTTTTTAATCCATCAGGATTTGAGTGGCAGAAGATAGTTGAGGATTGGGATGATTGGGCAAAATGGATAAGTAGTCGAGGTGGTATTGGTGTTCCTTCGAACAAGAGCTGGGAATCATGGTGGGATGAGGAACAGGAGCATCTGCAGCACACTGGGGCTTGGGGGCGGATTTGGGAGGTCATTCTTGTCCTACGTTTCTTTGTGTATCAGTATGGGGTTGTGTATCATCTACATGTAGCCAGAGGTGACAAGAGCATCACGGTTTATGGTCTGTCCTGGCTAGTCGTAGTAGCTGTCATGGTCATCTTGAAGATCGTGTCCATGGGTAGAAAAACGTTCAGCGCAGACTTTCAGCTGATGTTTCGGCTCCTCAAATTGTTTGTGTTTATTGGAACTGTTGTCATTCTAGTCTTGATGTTTGCATTACTTAGTCTCACAGTTGGAGACATCTTTGCAAGCCTTCTAGCCTTTTTGCCGACGGGTTGGGCACTTGTACAGATAGCTCAAGTGTGTAGACCATTGATGAAGGGCATTGGAATGTGGGGATCTGTCAAAGCTTTGTCAAGAGGGTTCGAATACGTTATGGGAGTGGTTATCTTTGCACCAGTGGCTATATTAGCTTGGTTCCCATTTGTTTCAGAATTCCAAACTAGACTGCTATACAACCAAGCATTCAGCCGAGGGCTTCAAATCCAGCGCATTCTGGCTGGTGGCAAGAAGAATAAATAA 3264 0.42 MDLLLVPYSLGPSLKIIQWPPFLLASKIPVALDMATQFRGRDSDLWRRICADEYMKCAVIECYESFKHVLHDLVIGETEKRIISTIIKEVESNMSKNTLITNFRMGFLPSLCKKFVELVEILKDADPSKRGTVVVLLQDMLEVVTDMMVNEISELAELNQSSKDTGQQVFAGTEAKPAIVFPPVITAQWEEQIRRLYLLLTVKESAIEVPTNSEVRRRIAFFTNSLFMDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDIEVENEDGVSIIYYLQKIFPDEWNNFMERLDCKKDSEIWEKEENILQLRHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMASEKEILNGYKAITIPSEEDKKSQRSLYANLEAMADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGKVQKVYYSVLIKAVDNLDQEIYRIKLPGPAKLGEGKPENQNHAIIFTRGEALQAIDMNQDNYLEEALKMRNLLEEFSEDHGVRPPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHFTRGGISKASRGINLSEDIFAGFNSILRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTISRDIYRLGHRFDFFRMLSFYFTTVGFYISSMLVVITVYAFLYGKLYLSVSGLEAAIVKFARRKGDNALKAAMASQSLVQIGLLMTLPMVMEIGLERGFRTALGDIIIMQLQLAPVFFTFSLGTKLHYFGRTLLHGGAKYRATGRGFVVRHEKFAENYRMYSRSHFVKGLELAILLICYRLYGTAAPDSIGYGLLSWSMWFLVCSWLFSPFLFNPSGFEWQKIVEDWDDWAKWISSRGGIGVPSNKSWESWWDEEQEHLQHTGAWGRIWEVILVLRFFVYQYGVVYHLHVARGDKSITVYGLSWLVVVAVMVILKIVSMGRKTFSADFQLMFRLLKLFVFIGTVVILVLMFALLSLTVGDIFASLLAFLPTGWALVQIAQVCRPLMKGIGMWGSVKALSRGFEYVMGVVIFAPVAILAWFPFVSEFQTRLLYNQAFSRGLQIQRILAGGKKNK. 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06286 1087 Pfam 1,3-beta-glucan synthase component 300 904 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Seca12g06286 1087 Pfam 1,3-beta-glucan synthase component 209 295 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Seca12g06286 1087 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1082 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06286 Seca-Chr12 154749501 154757419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06286 1 1087 Glycosyltransferase AT1G05570 61.566 0.0 1420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06286 K11000 - gmx:100779472 2039.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01958 4 32898398 32913014 Seca12g06286 12 154749501 154757419 PCT