Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05733 ATGTCTGCTGCTGTTGGAGCTGTGTCAACAACTAAAGATGTTCCCTTTAATGTTCATTTGGAGGAAGAGCTCAAAAACAAAGGAACCAACAAGGTTGATGGTGTCAACTATGATGATGCTGAAGAAACTGAGCCAGAGGAAGAGGAAGACTCCAAGTTGGAATTAGATCTTGGCCCTCAGTTTTCCCTCAAGGAGCAACTTGAGAAGGATAAAGATGATGAAAGTTTGAGGAAATGGAAGGAGCAACTTCTTGGAAGTGTTGATATGTCTGCTGTTGGAGAACCAGAAGTGAAGATAGTTAGCCTCACCACTATATGCCCCGGAAGACCTGACCTCATCCTACCAATTCCATTCACAACTGATTCTAAGAAAAGCATCTTCACCCTTAAAGAAGGAAGCCAATACCGTCTGAAATTCTCTTTCATCGTCTCCAACAACATCGTTTCTGGCCTCAAATACTCCAATGTTGTTTGGAAAACTGGGTTATGTGACTTTCATGAATTTGTTGAAATAGTGGACAATACAAAAAAAATGTTGGGAACTTATAGTCCACAGCAGGAACCATACACATATGAGTTGGAAGAAGAAACTACCCCTTCAGGATTGTTCGCTAGGGGAACCTATTCAGCAAGAACCAAGTTTGTAGATGATGATCGCAAATGCTACTTGGATGTTAGTTACCATTTTGAAATTCAAAAGAATTGGCCTACACCTCATTGA 720 0.4083 MSAAVGAVSTTKDVPFNVHLEEELKNKGTNKVDGVNYDDAEETEPEEEEDSKLELDLGPQFSLKEQLEKDKDDESLRKWKEQLLGSVDMSAVGEPEVKIVSLTTICPGRPDLILPIPFTTDSKKSIFTLKEGSQYRLKFSFIVSNNIVSGLKYSNVVWKTGLCDFHEFVEIVDNTKKMLGTYSPQQEPYTYELEEETTPSGLFARGTYSARTKFVDDDRKCYLDVSYHFEIQKNWPTPH. 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05733 239 Gene3D Coagulation Factor XIII, subunit A, domain 1 54 237 IPR024792 -
Seca12g05733 239 MobiDBLite consensus disorder prediction 16 38 - -
Seca12g05733 239 PANTHER RHO GDP-DISSOCIATION INHIBITOR 41 236 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Seca12g05733 239 MobiDBLite consensus disorder prediction 39 53 - -
Seca12g05733 239 Pfam RHO protein GDP dissociation inhibitor 41 234 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Seca12g05733 239 MobiDBLite consensus disorder prediction 1 55 - -
Seca12g05733 239 FunFam Rho GDP-dissociation inhibitor 1 53 237 - -
Seca12g05733 239 SUPERFAMILY E set domains 40 236 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05733 Seca-Chr12 149029585 149031891 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05733 K12462 - gmx:100806852 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01615 6 69041260 69044039 Seca12g05733 12 149029585 149031891 PCT