Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05673 ATGCCTCCTTCTAACTTCCCTCTTCGTTGGGAGAGCACAGGTGACAAATGGTGGTATGCATCTCCTATTGATTGGGCAGTTGCAAATGGCCTCTATGATCTTGTCCTTGAGCTTCTTCACCTTGACACAAACCTACTCATTAAGCTCACTTCCCTTCCTAGAATTCGCCGCCTTGAAACTGTGTGGGATGATGAGTCTCAGTTTGAAGATGTTGCTAAGTGTCGCTCTAAGGTTGCAAGGAATCTTCTTCTTGAGTGTGAGACAGGAAGAGGAGGACACAACTCTCTCATGAGTGCTGGATATGGTGGATGGCTTCTTTACACTGCTGCATCAGCTGGGGATGTGGACTTTGTTAAGGAATTGTTGGGAAGAAACCCTTTGTTAGTGTTTGGTGAAGGAGAGTATGGTGTCACTGACATGTTGTATGCTGCAGCTAGGAGTAAGAACTCTGAGGTATTCAAGATGCTGCTTGATTCTGCTCTCTCAAGAAAAGAGTGTCTTAGTAACATTGGAACAGAATTGGAAGAGAAGTTAGATGAAGGTGCTTGTGTTTTTAAGAGGGACATGGTGAATAGGGCCATTCATGCTGCTGCTAGAGGAGGGAATTGGGAAATATTGAAGCAGCTTATAGGAAGTGTTTCTCAGATTTCATCATATAGAGATGCTCAAGGATGTACAGTCTTGCATGCAGCAGCTGGAAAGGGACAAATTGAGGTGGTGAGAAATCTAATTGCATCATTTGATATTATCAACTCAACTGATGCTCAAGGCAATACAGCATTACATGTGGCTTCTTACAGAGGTTATTTACCTGTGGTAGAGATTCTGATTGGAGCATCTCCTTCATTAACAAAGTTAACCAATCACAATGGAGATACTTTCCTTCATATGGCAGTGTTTGGTTTCAGAAGCCCTGGTTTCTGCAGACTAGACAAGCACACTGAGCTCATGGAACAATTGCTAAGTGAAAAGATTGTGAACATGCAAGACATCATCAATATCAGGAACAATGATGGAAGAACAGCTCTTCATGTAGCTGTTATTCATGATGTCCAATGTGATGTAGTGGAACTATTGATGTCTGTTCCATCAATTGATTTGAACATTCATGATGTTGATAGGATGACCCCTTTGGATCATCTGAAGCAAAGACCAAGATCAGCATCTTCTGATATTTTAATCAAACAGTTAATTTCAGCTGGAGGGATCTCTAATTGTGAGGATTATATCACAAGAAATGCACTTGTGACTCATCTTAAAACTCATGGTATTGCAGCTAGTCCTGGAACTTCATTTAGAATAGCAGATGCAGAGATACTCTTGTACACAGGCATTGAGAAAGAGAATTCTTCTGAAGCCAATTATGATCAGGCAAGTGTAGAATCAAACTCATGCTTAAGTGAAATAAACAATTATGAGTCAACCAATTCTCCATATAACAACAAGTCTAGTTCTGCCAATCATGCTGCAAGAAGCTTAAAGAATCTTCTTCAGTGGCCTAGAAGAAGAGAGACAAAAACAACAAAAGAAGCAGAATTAGAGTTGGAAGATGATAATTCTGTGGATTCTTTCAATACAAGGAAAAATTTGGAAGAATTTCCAGTCCCATTAAGGCAAAGGTACTCAAAATCTTGCTCTCTTCCAAACAATAAAAGAACTCTATCTATAAGGACTTATCTTCCAAGTCCTTCAGCAAAAAACTATTTCACTGCAGGCCTAATGCAAGGTGTGATTAAGGTAAAGCCACATGTGCTTCTTCCTTCACATTCAATTGCTAGTCCTTTTCAAGAGTTGTCTATTTCTTCAAACAATAAGCAAAAATGTGTTGATATAATGGGACCCTCTTGCTCCAATCGACCAATAGATGATGGTGGTACAGTACAATTGAACTATAAGCAGAGCTCCTTCAATAAGAAATTGATGAACCGATTTTTTTCATTTGGAGCACAAGGCCAGGCTTTGGAAGATGCAAATAGCTGCACAATGCCAAATAGCAGTTATAAGGGTTTCAGTTCTTTAGTTTCATAA 2028 0.3974 MPPSNFPLRWESTGDKWWYASPIDWAVANGLYDLVLELLHLDTNLLIKLTSLPRIRRLETVWDDESQFEDVAKCRSKVARNLLLECETGRGGHNSLMSAGYGGWLLYTAASAGDVDFVKELLGRNPLLVFGEGEYGVTDMLYAAARSKNSEVFKMLLDSALSRKECLSNIGTELEEKLDEGACVFKRDMVNRAIHAAARGGNWEILKQLIGSVSQISSYRDAQGCTVLHAAAGKGQIEVVRNLIASFDIINSTDAQGNTALHVASYRGYLPVVEILIGASPSLTKLTNHNGDTFLHMAVFGFRSPGFCRLDKHTELMEQLLSEKIVNMQDIINIRNNDGRTALHVAVIHDVQCDVVELLMSVPSIDLNIHDVDRMTPLDHLKQRPRSASSDILIKQLISAGGISNCEDYITRNALVTHLKTHGIAASPGTSFRIADAEILLYTGIEKENSSEANYDQASVESNSCLSEINNYESTNSPYNNKSSSANHAARSLKNLLQWPRRRETKTTKEAELELEDDNSVDSFNTRKNLEEFPVPLRQRYSKSCSLPNNKRTLSIRTYLPSPSAKNYFTAGLMQGVIKVKPHVLLPSHSIASPFQELSISSNNKQKCVDIMGPSCSNRPIDDGGTVQLNYKQSSFNKKLMNRFFSFGAQGQALEDANSCTMPNSSYKGFSSLVS. 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05673 675 Gene3D - 11 423 IPR036770 -
Seca12g05673 675 MobiDBLite consensus disorder prediction 494 513 - -
Seca12g05673 675 SUPERFAMILY Ankyrin repeat 105 394 IPR036770 -
Seca12g05673 675 ProSiteProfiles Ankyrin repeat region circular profile. 223 244 - -
Seca12g05673 675 ProSiteProfiles Ankyrin repeat profile. 256 288 IPR002110 GO:0005515
Seca12g05673 675 Pfam Ankyrin repeats (3 copies) 194 282 IPR002110 GO:0005515
Seca12g05673 675 Pfam Ankyrin repeat 338 371 IPR002110 GO:0005515
Seca12g05673 675 ProSiteProfiles Ankyrin repeat profile. 223 255 IPR002110 GO:0005515
Seca12g05673 675 SMART ANK_2a 189 218 IPR002110 GO:0005515
Seca12g05673 675 SMART ANK_2a 373 408 IPR002110 GO:0005515
Seca12g05673 675 SMART ANK_2a 135 165 IPR002110 GO:0005515
Seca12g05673 675 SMART ANK_2a 223 252 IPR002110 GO:0005515
Seca12g05673 675 SMART ANK_2a 290 330 IPR002110 GO:0005515
Seca12g05673 675 SMART ANK_2a 338 369 IPR002110 GO:0005515
Seca12g05673 675 SMART ANK_2a 101 130 IPR002110 GO:0005515
Seca12g05673 675 SMART ANK_2a 256 285 IPR002110 GO:0005515
Seca12g05673 675 SMART ANK_2a 18 47 IPR002110 GO:0005515
Seca12g05673 675 PANTHER MOLTING PROTEIN MLT-4 102 278 - -
Seca12g05673 675 ProSiteProfiles Ankyrin repeat region circular profile. 256 277 - -
Seca12g05673 675 MobiDBLite consensus disorder prediction 497 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05673 Seca-Chr12 148279689 148283261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05673 89 379 Miscellaneous Gene Families AT2G31820 29.831 4.97e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05673 - - gmx:100791999 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01743 6 72205458 72208756 Seca12g05673 12 148279689 148283261 PCT