Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05090 ATGGCAACCATGGAGAAACAGGAACACGAAGAAGAAGAAGAGTCTCCGATTGAGGAAGTGCGGTTAACAGTAACTAACACTGATGACCCGACCCTACCCGTTTGGACCTTTCGGATGTGGTTATTGGGTCTTCTCTCTTGCTCCTTATTGTCCTTCCTCAACCAGTTCTTCGCCTACAGATCAGAGCCACTCATCATTACCCAAATCACCGTCCAGATCGCTACTCTTCCACTTGGCCACCTCATGGCCGCAATCCTCCCAACCAGCACGTTCCGCATCCCCGGGTTCGGGTCGAAGCGCTTCTCTTTCAACCCGGGTCCCTTCAACATGAAGGAACATGTTCTCATCACTATATTCGCCAATGCAGGCAGCGCATTCGGGTCCGGGTCACCCTACGCTGTTGGCATCGTTAATATCATTAAAGCCTTCTATGGAAGGTCCATCTCCTTCATCGCTTCCTGGCTTCTCATCATCACCACTCAGGTGTTAGGATACGGGTGGGCGGGGTTACTGAGGAAGTACGTGGTAGAGCCCGCTCATATGTGGTGGCCCAGCACACTGGTCCAAGTCTCTCTTTTCCGGTACATTTACATACAAACCTTGTTGATATGCAGAGCTTTGCATGAGAAAGAAGATGAAAACCAATTTTCACGGGCAAAGTTTTTCTTTATTGCACTAGTATGCAGTTTTTCATGGTACCTGATTCCAGGATTCTTCTTCACAACTCTCACAAACATATCATGGGTATGTTGGATATTCTCCAACTCAGTCACAGCTCAACAGATAGGCTCAGGCATGAATGGTTTAGGACTTGGAGCCCTTACACTTGATTGGTCTGCTGTGGCATCATTCCTTTTCAGCCCTCTTATCTCACCCTTCTTTGCAATTGTCAATGTTTTTGTGGGCTATGCATTGATTATCTATCTTGTGATTCCTATAGCATATTGGGGGCTTAATGTGTATAGTGCAAATAAGTTCCCCATTTTCTCCTCAGACTTGTTCACAGCTCAAGGCCAAGAATACAACATATCTGCTATCGTCAATGAAAAGTTTGAGCTTGATCTTGCAAAGTATCATGAACAAGGTCGAATTAATCTCAGTGTGTTCTTTTCTCTCACTTATGGATTTGGATTTGCCACTATAGCATCCACCATTACACATGTTGCTTGCTTCTATGGAAGATGCTATGTCAGGGAGATTATGGAGCGGTATCGTGCTTCAGCAAAGGGAAAGGAAGATATCCACACAAAGTTGATGAAAAAATACAAAGATATACCTTCTTGGTGGTTTTATGTGTTGCTGAGTGTGGCACTTGTAGTTTCTTTTATAATGTGCATTTTTCTAAATAGCCAGATTCAGATGCCGTGGTGGGGACTTGTCTTTGCTTCAGCCTTGGCCTTTATATTTACACTCCCAATTAGCATCATAACTGCTACAACAAACCAGACACCTGGGTTAAATATCATTACTGAGTATATCTTTGGTCTTATTTACCCTGGAAGACCAATAGCAAATGTATGCTTCAAAACCTACGGTTACATAAGCATGGCTCAGGCTGTTTCCTTCCTTAGCGATTTCAAGCTTGGCCACTACATGAAGATCCCTCCAAGATCAATGTTCTTAGTTCAGTTCATTGGCACAGTGCTGGCTGGAACTATCAACATTGGTGTAGCATGGTGGTTGCTAAACTCTATCGATAACATATGTCATAAAGATCTCCTTCCAGAAGGGAGTCCCTGGACATGTCCAAGTGACCGTGTTTTCTTTGATGCATCAGTTATTTGGGGTCTTGTAGGACCAAAGAGGATCTTTGGTTCTCATGGAAACTACAAAGCATTGAACTGGTTTTTCCTTGGAGGTGCAATAGGGCCAATAATAGTTTGGCTATTGCATAAGGCATTCCCTAAACAGTCATGGATTCCCTTGATTAATCTTCCAGTACTCTTGGGAGCAACTGGAATGATGCCACCAGCAACAGCATTGAACTATAATGCCTGGATTTTAGTTGGAACAATTTTCAACTTCTTTATCTTCCGTTACAGAAAGAAATGGTGGCAGAGATACAACTACGTTCTATCAGCAGCACTTGATGCAGGAGTTGCTTTTATGGCTGTAATGCTTTACTTTGCATTGGGTCTTGAAAACATAAGTCTCAATTGGTGGGGAACTGCTGGTGAGCATTGTCCTCTAGCAACTTGCCCAACAGCCAAGGGCATAGTGGTTGATGGTTGTCCTGTGAACTGA 2244 0.4381 MATMEKQEHEEEEESPIEEVRLTVTNTDDPTLPVWTFRMWLLGLLSCSLLSFLNQFFAYRSEPLIITQITVQIATLPLGHLMAAILPTSTFRIPGFGSKRFSFNPGPFNMKEHVLITIFANAGSAFGSGSPYAVGIVNIIKAFYGRSISFIASWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQVSLFRYIYIQTLLICRALHEKEDENQFSRAKFFFIALVCSFSWYLIPGFFFTTLTNISWVCWIFSNSVTAQQIGSGMNGLGLGALTLDWSAVASFLFSPLISPFFAIVNVFVGYALIIYLVIPIAYWGLNVYSANKFPIFSSDLFTAQGQEYNISAIVNEKFELDLAKYHEQGRINLSVFFSLTYGFGFATIASTITHVACFYGRCYVREIMERYRASAKGKEDIHTKLMKKYKDIPSWWFYVLLSVALVVSFIMCIFLNSQIQMPWWGLVFASALAFIFTLPISIITATTNQTPGLNIITEYIFGLIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTVLAGTINIGVAWWLLNSIDNICHKDLLPEGSPWTCPSDRVFFDASVIWGLVGPKRIFGSHGNYKALNWFFLGGAIGPIIVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATALNYNAWILVGTIFNFFIFRYRKKWWQRYNYVLSAALDAGVAFMAVMLYFALGLENISLNWWGTAGEHCPLATCPTAKGIVVDGCPVN. 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05090 747 NCBIfam OPT family oligopeptide transporter 18 713 IPR004813 GO:0035673
Seca12g05090 747 PANTHER ISP4 LIKE PROTEIN 5 746 IPR004648 GO:0055085
Seca12g05090 747 Pfam OPT oligopeptide transporter protein 35 710 IPR004813 GO:0035673
Seca12g05090 747 NCBIfam small oligopeptide transporter, OPT family 12 716 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05090 Seca-Chr12 138595383 138600761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05090 1 747 Organic Solute Cotransporters AT5G64410 78.179 0.0 1230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05090 - - gmx:100819886 1350.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g05065 6 117910801 117918097 Seca12g05090 12 138595383 138600761 PCT