Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04909 ATGGGGCTTGAGGGTGGAGATCAATATACTATAGATCTATCACTCATAGAGGATGGAGAAGTGGTGGTTGGAGTTCTTGGGTGTCCTAACTACCCAATGAGAAAGGACTGGTTAAGTTATCAGCACAGCTATCTTAGGATTCTATCCAAGTTGATTCCTGCAACCTCTGAAACTTGGGATAAAGGTTGTGTAATTTATGCTAAAAGGGGTAGTGGCAAGGCTTGGATCCAACCACTTCTCCATGTCAATAAGAAGTTTGTGTGGCCAAATCATGCAAAACAAGCTTCTGTCTCTTGCATTGACAACCCAGCATTGGCCACTTTCTGTGAACCAGTTCAGAAGGCCAATTCAAGCCACTCTTTTACTGAAGGACTGGCTCATAGTGTTTGTCTCTGTAATCAGCCATTAAGAGTTTACAGCATGATCAAATATGCTGCAATAGCTTGTGGGGATGCTGAGGTTTTCATGAAGTTGGCAAGGGCTGGTTACAAGGAGAAAATATGGGATCATGCTGCTGGAGTTATCATCATACAAGAAGCTGGAGGTGTGGTAACAGATGCTAGGGGGAGTCCCTTGGACTTCTCAAAAGGTTCATATTTAGAAGGGATTGATCGTGGTATAGTTGCTTGTACTGGAGCCACTTTACATGAAAAGATCATTGATGCTGTTGATGCTAGCTGGGTCTCTTCTTGCCTATGA 699 0.4335 MGLEGGDQYTIDLSLIEDGEVVVGVLGCPNYPMRKDWLSYQHSYLRILSKLIPATSETWDKGCVIYAKRGSGKAWIQPLLHVNKKFVWPNHAKQASVSCIDNPALATFCEPVQKANSSHSFTEGLAHSVCLCNQPLRVYSMIKYAAIACGDAEVFMKLARAGYKEKIWDHAAGVIIIQEAGGVVTDARGSPLDFSKGSYLEGIDRGIVACTGATLHEKIIDAVDASWVSSCL. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04909 232 Gene3D - 96 226 - -
Seca12g04909 232 PANTHER PHOSPHATASE 6 229 - -
Seca12g04909 232 Gene3D - 3 86 - -
Seca12g04909 232 FunFam PAP-specific phosphatase HAL2-like 96 229 - -
Seca12g04909 232 Pfam Inositol monophosphatase family 5 226 IPR000760 -
Seca12g04909 232 SUPERFAMILY Carbohydrate phosphatase 4 224 - -
Seca12g04909 232 ProSitePatterns Inositol monophosphatase family signature 2. 168 182 IPR020550 GO:0046854
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04909 Seca-Chr12 134211116 134212428 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04909 K01082 - gmx:100796061 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g04909 12 134211116 134212428 Seca6g04952 6 116965718 116969651 PCT