Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03664 ATGGTGTTTGCTTGCTCAGATTCAAGAGTTTGCCCATCCCATGTTCTGGATTTCCAACGGGGCGAAGCCTTTGTGGTCAGAAACATCGCCAACATGGTTCCTCCATATGACAAGACGAAGTATTCAGGAACAGGGGCTGCGATTGAATATGCAGTCTTACATCTAAAGGAAGCTGTGAATGTATCACTTGGTAACTTATTGACTTGTCCATTTGTGAGAGATGGGGTTGTGAAGAAAACACTTGCTTTGAAAGGTGCACATTACGATTTTGTCAAGGGAACCTTTGAGTTGTGGAATCTTGACTTCAAAATCTCACCCTCTGTATCCATTTAA 333 0.4264 MVFACSDSRVCPSHVLDFQRGEAFVVRNIANMVPPYDKTKYSGTGAAIEYAVLHLKEAVNVSLGNLLTCPFVRDGVVKKTLALKGAHYDFVKGTFELWNLDFKISPSVSI. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03664 110 PANTHER CARBONIC ANHYDRASE 56 102 IPR001765 GO:0004089|GO:0008270
Seca12g03664 110 SUPERFAMILY beta-carbonic anhydrase, cab 1 106 IPR036874 GO:0004089|GO:0008270
Seca12g03664 110 SMART Pro_CA_2 1 99 IPR001765 GO:0004089|GO:0008270
Seca12g03664 110 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 5 12 IPR015892 GO:0004089|GO:0008270|GO:0015976
Seca12g03664 110 Gene3D Carbonic anhydrase 1 56 IPR036874 GO:0004089|GO:0008270
Seca12g03664 110 Gene3D Carbonic anhydrase 57 110 IPR036874 GO:0004089|GO:0008270
Seca12g03664 110 Pfam Carbonic anhydrase 1 56 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03664 Seca-Chr12 93611237 93612931 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03664 K01673 - han:110879292 134.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02908 10 38655220 38659396 Seca12g03664 12 93611237 93612931 PCT