LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca12g03639	ATGGCGGAGAAGAGATTCGGCGTGATAGGGTACGCGCTGGCGCCTAAGAAGCAGAACAGCTTCATCCGCGACTCGCTGGTTACGCTGGCGAAGTCACGAGGGATCGAGCTCGTGCGCGTGGACTCGGAGCGTGCGCTGGCGGATCAGGGGCCGTTCGATTGTGTGCTCCACAAGCTCTACGGCGACGATTGGAAGCGTCAGTTACAGGAATTCAAAGCGCGGAACCCAAATGCGGTGATACTGGACGCGCCGGAAGCGATCGAGAGGCTTCACAACCGGATATCGATGCTGCAGGTGGTGTCGGAGCTGAGGGTGGAGGACCGAAGCGAGACGTTCGGGATCCCGAAGCAGATAGTAATATACGACAAGGAAACCCTTTCGGACGGGCAAGCGTGGGAGAGCTTGAAGTTTCCGGTGATAGCGAAGCCTCTGGTGGCGGACGGAAGCGCCAAGTCGCACAAGATGGCGCTTGTGTTCAGCCACGGCGCGCTTAACAAGCTCAAGCCGCCGATCGTGCTTCAGGAGTTTGTGAACCACGGTGGCGTGATCTTCAAGGTGTACGTGGTCGGGGAGCACGTGCGGTGTGTGAAGAGAAAGTCCCTCCCGGACGTGTCGGAGGAGAAGGCGTTAGGCGTTTCGGAAGACTTGCTGTCGTTTTCACAGGTCTCCAATTTGGCCAACCGCGAGGACGACGACAAATATTACCAGCTGATGCATTTGGACGACACCGAGATGCCCCCATACGGCTTCATTGTCGACATTGCCAGCGGATTAAGGCGCGCCATGAAGTTGAACCTTTTCAACTTTGATGTGATTCGGGATTCAAGATATGGGAACCGCTACCTCATTATTGATATTAATTACTTCCCTGGGTATGCCAAAATGCCAGGTTACGAGACGGTTTTGACAGAATTTTTCTGCGATGTAATGTACAAGAAACAACAAGAAGAACAAGCGGAAGAGGTCACAAAGATTATAAGCAATACCTCTTGTGGTGATGAGGATGAGGGTAACCTTCCTACAGAAACAGAGAAATCCGTTCAGGTCTAA	1050	0.5343	MAEKRFGVIGYALAPKKQNSFIRDSLVTLAKSRGIELVRVDSERALADQGPFDCVLHKLYGDDWKRQLQEFKARNPNAVILDAPEAIERLHNRISMLQVVSELRVEDRSETFGIPKQIVIYDKETLSDGQAWESLKFPVIAKPLVADGSAKSHKMALVFSHGALNKLKPPIVLQEFVNHGGVIFKVYVVGEHVRCVKRKSLPDVSEEKALGVSEDLLSFSQVSNLANREDDDKYYQLMHLDDTEMPPYGFIVDIASGLRRAMKLNLFNFDVIRDSRYGNRYLIIDINYFPGYAKMPGYETVLTEFFCDVMYKKQQEEQAEEVTKIISNTSCGDEDEGNLPTETEKSVQV.	350

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca12g03639	349	Gene3D	-	85	291	-	-
	Seca12g03639	349	Pfam	Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain	108	307	IPR040464	-
	Seca12g03639	349	PIRSF	ITPK	1	322	IPR008656	GO:0000287\|GO:0005524\|GO:0032957\|GO:0047325\|GO:0052725\|GO:0052726
	Seca12g03639	349	MobiDBLite	consensus disorder prediction	326	349	-	-
	Seca12g03639	349	Pfam	Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain	8	87	IPR041429	-
	Seca12g03639	349	FunFam	Inositol-tetrakisphosphate 1-kinase	83	291	-	-
	Seca12g03639	349	PANTHER	INOSITOL-TETRAKISPHOSPHATE 1-KINASE	6	316	IPR008656	GO:0000287\|GO:0005524\|GO:0032957\|GO:0047325\|GO:0052725\|GO:0052726
	Seca12g03639	349	SUPERFAMILY	Glutathione synthetase ATP-binding domain-like	84	293	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca12g03639	Seca-Chr12	92809710	92810759	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca12g03639	K00913		-	gmx:100127430	561.222

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Seca12g03639	12	92809710	92810759	Seca12g03639	12	92809710	92810759	ECH
	Seca10g01305	10	13087336	13088454	Seca12g03639	12	92809710	92810759	PCT