Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01840 ATGTTCACTGCTAGCAAACTAGCCTTCACATTAACATCCCCTCGTCCATGCACTGCACCTACTCCAACACCCTTCAGATCCTCTTCTTCTTCTGTTTGCCGTATCCACATTCACTTGATCAATGGCCGCCACTTATCACTTCGTCGCAGGCTATTTCTACTCTCCCCTAAGGCCACTGCTGATCAACAAGGGAAGGTTGAAGAATTTGAAGAAGATGCTGTTGATAGTAAAATCCTCCCATATTGTAGCATAGATAAAAAGGATCAGAAGAAATCAGTTGGTGAAATGGAGCAAGAATTTCTTCAAGCACTACAAGCATTTTATTATGAGGGAAAGGCTATCATGTCGAATGAAGAATTTGATAATCTCAAGGAAGAACTCATGTGGGAAGGAAGCAGTGTTGTCATGCTAAGTTCGGATGAACAAAAATTTCTGGAAGCTTCTATGGCTTATGTATCTGGGAAACCAATTCTGAGTGACAAGGAGTATGATGATTTAAAATTGAGGCTAAAGATGGAAGGGAGTGAAATTGTGGTCGAGGGTCCAAGGTGCAGTCTTCGTAGTAAAAAGGTTTACAGTGACCTGTCTGTTGACTATTTGAAGATGTTCCTTCTGAACGTCCCAGCCACTGTGATTGCATTAGGATTGTTCTTCTTCCTCGATGATCTGACTGGATTTGAGATCACATATCTTCTGGAGTTGCCGGAGCCTTTTAGTTTCATTTTCACCTGGTTTGCTGCTGTTCCCCTCATTGTGTGGCTAGCTCTGTCACTAACAAACGCCATTGTAAAAGATTTTTTGATTTTAAAGGGTCCCTGTCCAAACTGTGGTACTGAAAATACCTCCTTCTTTGGGACAATACTGTCAATTTCAAGTGGTGGTTCCAACAACACTGTCAAATGCTCTGAGTAA 912 0.4178 MFTASKLAFTLTSPRPCTAPTPTPFRSSSSSVCRIHIHLINGRHLSLRRRLFLLSPKATADQQGKVEEFEEDAVDSKILPYCSIDKKDQKKSVGEMEQEFLQALQAFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGKPILSDKEYDDLKLRLKMEGSEIVVEGPRCSLRSKKVYSDLSVDYLKMFLLNVPATVIALGLFFFLDDLTGFEITYLLELPEPFSFIFTWFAAVPLIVWLALSLTNAIVKDFLILKGPCPNCGTENTSFFGTILSISSGGSNNTVKCSE. 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01840 303 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 13 302 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01840 Seca-Chr12 21107016 21111773 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01840 - - gmx:100784314 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01840 12 21107016 21111773 Seca12g01840 12 21107016 21111773 ECH
Seca10g00397 10 3483743 3487157 Seca12g01840 12 21107016 21111773 PCT