Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g00397 ATGGCTGGCAAATTAGCTTTCACATTGACATACCCACGTCCACTCACACCAATTCCAAACTCTGCTTCAACTAATTCTAGACTGCACCTTCACCTTATTCCATTCAATGCCCGCCACTTATGCCTTCGCCGCCGGTTATTTGTGTTTTCCACCAAGGCCTCCTCCGCTGATCAACAAGGCAAGGTTGAGGAAGATGATGTTGTTGATAGTAAAATCTTACCTTATTGTAGCATAGACAAGAAACAGAAGAAATCAGTTGGTGAGCTTGAGCAAGAATTTCTTCAAGCACTGCAAGCATTCTATTATGAGGGAAAGGCTATTATGTCCAATGAGGAATTTGATAATCTCAAGGAAGAACTCATGTGGGAAGGAAGCAGCGTTGTAATGCTAAGTTCTGATGAACAAAAATTCTTGGAAGCGTCTATGGCATATGTGTCTGGAAAACCAATCCTGAATGATAAAGAGTTCGATGATTTGAAACTGAGGCTAAAGATGGAAGGAAGTGAGATTGTGGCTGAGGGTCCACGGTGCAGTCTTCGCAGTCGAAAGGTCTACAGTGACCTGTCTGTTGACTATTTAAAGATGTTCCTGCTGAACGTCCCTGCAACTGTGCTTGCATTAGGATTGTTCTTCTTCCTTGATGACGTGACTGGATTTGAGGTCTCATATCTGATAGAGATTCCAGAACCTTATGCTTTCATTTTAACTTGGTTTGCTGCTGTTCCCTTCATTGTGTGGCTGGCTCGGGCAATTACCAATGCAATTGTAAAAGATTTTTTGATTTTAAAGGGACCCTGTCCTAACTGTGGTACTGAAAATACCTCCTTCTTTGGGACTATACTGTCAATTTCAAGTGGCAATTCCACCAACAAGGTCAAATGTGAAAACTGTGGTACCGCAATGGTGTATGATTCAAGTACAAGATTGATTACCTTGCCGGAAGGAAGTAATGCCTGA 957 0.4222 MAGKLAFTLTYPRPLTPIPNSASTNSRLHLHLIPFNARHLCLRRRLFVFSTKASSADQQGKVEEDDVVDSKILPYCSIDKKQKKSVGELEQEFLQALQAFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGKPILNDKEFDDLKLRLKMEGSEIVAEGPRCSLRSRKVYSDLSVDYLKMFLLNVPATVLALGLFFFLDDVTGFEVSYLIEIPEPYAFILTWFAAVPFIVWLARAITNAIVKDFLILKGPCPNCGTENTSFFGTILSISSGNSTNKVKCENCGTAMVYDSSTRLITLPEGSNA. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g00397 318 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 23 308 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g00397 Seca-Chr10 3483743 3487157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g00397 - - gmx:100785186 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g00397 10 3483743 3487157 Seca10g00397 10 3483743 3487157 ECH
Seca10g00397 10 3483743 3487157 Seca12g01840 12 21107016 21111773 PCT