Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01829 ATGATTCTCCCAATTTCATCGGTTCCTTCTACTCCAAGACCAAGGCTATGGGTTGAAGATCTGCTCAGGAACTATGATAATGTATGTACCTTGCGAGTCAGGATGCCTATCTCGTCTGATTTATCCAACCCACGCAATTTCATCACAAAGATCACTAGATATGATAAGGTTGTGGATATTCCAAATTCAATGACTATATTGGATGAACTCCTTCCTCTCTCCTTAGAGATGGCAAAGAGAAATCTCACTGGAATCTGGAACTTCACAAACCCTGGAGTGGTCAGCCACAATGAAATCTTGGAGATGTACAGAGAATATGTTGACCCCAACTTCACCTGGAAGAACTTCACTCTTGAGGAACAAGCCAAGGTGATAGTTGCCCCAAGAAGCAACAATGAGCTTGACGCTACAAAATTGAAGAAGGAATTTCCAGAACTATTGTCCATCAAGGACTCCCTCATTCAGAATGTCTTCAAGCCAAACCAGAAGGTTAAAGCTTAA 501 0.4192 MILPISSVPSTPRPRLWVEDLLRNYDNVCTLRVRMPISSDLSNPRNFITKITRYDKVVDIPNSMTILDELLPLSLEMAKRNLTGIWNFTNPGVVSHNEILEMYREYVDPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKKEFPELLSIKDSLIQNVFKPNQKVKA. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01829 166 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 142 IPR036291 -
Seca12g01829 166 Gene3D - 14 166 - -
Seca12g01829 166 PANTHER DTDP-4-DEHYDRORHAMNOSE REDUCTASE 19 163 IPR005913 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01829 Seca-Chr12 20916034 20917449 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01829 K12451 - mof:131164094 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01829 12 20916034 20917449 Seca12g01829 12 20916034 20917449 ECH
Seca10g00389 10 3419860 3421362 Seca12g01829 12 20916034 20917449 PCT