Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01553 ATGCTGCGGGTCGGCGCAAAGAGGGTTTTGGGAACGGCGTCGTTCGCTGTTAGGGTTCCGGCGCGGTTGTACCACGAGAGGGTGGTGGATCACTACAACAATCCCCGCAACGTGGGTTCCTTCGACAAGAATGACCCCAGCGTAGGCACCGGTTTGGTAGGGGCACCAGCTTGCGGCGACGTCATGAAGCTACAGATCAAGGTCGACGACAACACCGGAAAAATTGTCGATGCACGCTTCAAGACTTTCGGCTGCGGCTCCGCCATCGCTTCTTCCTCCGTCGGTCTACTGAATGGGTAA 300 0.5767 MLRVGAKRVLGTASFAVRVPARLYHERVVDHYNNPRNVGSFDKNDPSVGTGLVGAPACGDVMKLQIKVDDNTGKIVDARFKTFGCGSAIASSSVGLLNG. 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01553 99 SUPERFAMILY SufE/NifU 23 94 - -
Seca12g01553 99 CDD IscU_like 23 94 IPR002871 GO:0005506|GO:0016226|GO:0051536
Seca12g01553 99 Pfam NifU-like N terminal domain 24 94 IPR002871 GO:0005506|GO:0016226|GO:0051536
Seca12g01553 99 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 14 94 IPR002871 GO:0005506|GO:0016226|GO:0051536
Seca12g01553 99 Gene3D - 23 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01553 Seca-Chr12 16390270 16390742 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01553 K22068 - gmx:100526856 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01553 12 16390270 16390742 Seca4g03065 4 52577960 52580770 PCT