Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00085 ATGAACAACCAAAGAAAGTCAGGTTCTCCTAGGGGAGAGGTTGGAGAGATTGACACAAGGGCACCATTCCAATCTGTCAAAGCTGCTGTTAGTTTATTTGGTGAAGTAGCTGTCTCCAGGGACAGATATGCTGTCAAGAGAAGATCATCAGAGAATGTATTTGAAAAGGAGACACAACTTATCTTGGCCCAAAAAGAATTACACAAGTTAAAGAGACAGGTGGACAGTGCTGAAACCACCAAAGCTAAAGCACTTTCTGACCTTGAAAAGGCCAAGGAGACCCTTCTGAATTTGACAACCAAGCTCGCCAATGTCAGAGAATCTAAGCAATCAGCAATGGAAGCAGCTGAAGCTGTGAAGAGCAAACAATTTGAAAAGGCACTATCCCTAAAAGCTATAGGATATGAAGCTTGGAAACAAGAACTGGAACATGCAAGAGAAGAATACATGACTACAGTAACTGAATTAGATTCTTCCAAGCAAGAACTCACCAAAATCAGGCAGGATATGAATGCAGCTTTGGAGGCAAAGCTGGCAGCATTCCAGGCAGCAGGAGAAGCTCAGCGTTCAGCAAAACTAAACTCTGAAAGGATCAGTGAACTCTCAAATGAAATTTCAGCCATGAAAGCATCAATTGAACAATTGAAAATCGCCTCTGTACAATCCCAAGAAGAACAGGCAGAAGTCATGGAACAAAATGACACCCAACTTGGTTTCTACAAAACTGCTAAGGAAGAAGCACAGAACAAATTGGAGTCCTTAAAGAATGAATATGATCCAGAACTAATCAAAAGTCTAGATGCCAAGCTTGCTGAAACAAGTGCAGAGATTGAGGTCCTTCAAGAGCAGATGAAAAAGATCCACGCTTCTAAGATGGATTCCATGAGACTTCTAACATCAGAGCTTAAAGAAGCCACAAAGACACTGCAGGAGATTGCTGCAGAAGAAACCTCCCTTAAGAAACTAGTGTTTTCTCTTAGGACAGAATTAAAACAAGTGAAGAAGGAGCAAGATGAACTGAAAGAGAAGCAACAGACAGCAGAAGCTCTTACTGCTAACCTCACCGGCGAGCTGCAAGACAGTATGGAAGAGCCTAGGCCTGAGCCAGGTACTGTGGAGGATCTAGAAGCTAATATCTATCGCGTGCAGAGTGTCAAAATCCGGAAGCTCCAATCGGAAACTGAAAATACAAGAAGAGAAGCAGAAGAGATGAGAAGAAAAGCTCAAGAGTTGAAGCAAGAAGCTGAAAAATCCCAAGCTGTGGCTGAAGAAGCAGAGAAAAAATTAGAGCTTGTTCTGAAAGAGGCTAAAGCAGCCAAAGCAGCAGAACAAAGAGCCATTAAGGAGATGAAGATTTTGTCTGACATACAAAGTAGGGGCATAAATTCAAAATTCAGTGGTAAGATTAAAATGTCAAATGAAGAGTTTGAGTCACTGAATGGAAAAATCAAGGAATGTGGAGATGTGGCTGAAAAGAAAGAAGCAGCTGTCACGGCTGAGCTACAAGCAATCTACACAAGAAAAAATGAAATAGACAGAAAGATGAAAGCCAATCTGAAAGCTATTGAGGAAACAAAGGCTGCAACGGAGACAGCTTTGTGGTATGTAGAGATGGCCGATTCTGCAAAAGTGGCAATTGAGGATGAACTAAGGAGGTGGCATCAACAAGAACAGAAGGTGGTTGCTGATGCATCTTCGCAGATATTGAACCATTCAGATAATTCTTCACGACCAATCTCAGTGAGCATCTAG 1752 0.4189 MNNQRKSGSPRGEVGEIDTRAPFQSVKAAVSLFGEVAVSRDRYAVKRRSSENVFEKETQLILAQKELHKLKRQVDSAETTKAKALSDLEKAKETLLNLTTKLANVRESKQSAMEAAEAVKSKQFEKALSLKAIGYEAWKQELEHAREEYMTTVTELDSSKQELTKIRQDMNAALEAKLAAFQAAGEAQRSAKLNSERISELSNEISAMKASIEQLKIASVQSQEEQAEVMEQNDTQLGFYKTAKEEAQNKLESLKNEYDPELIKSLDAKLAETSAEIEVLQEQMKKIHASKMDSMRLLTSELKEATKTLQEIAAEETSLKKLVFSLRTELKQVKKEQDELKEKQQTAEALTANLTGELQDSMEEPRPEPGTVEDLEANIYRVQSVKIRKLQSETENTRREAEEMRRKAQELKQEAEKSQAVAEEAEKKLELVLKEAKAAKAAEQRAIKEMKILSDIQSRGINSKFSGKIKMSNEEFESLNGKIKECGDVAEKKEAAVTAELQAIYTRKNEIDRKMKANLKAIEETKAATETALWYVEMADSAKVAIEDELRRWHQQEQKVVADASSQILNHSDNSSRPISVSI. 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00085 583 Coils Coil 60 108 - -
Seca12g00085 583 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 15 559 - -
Seca12g00085 583 MobiDBLite consensus disorder prediction 564 583 - -
Seca12g00085 583 MobiDBLite consensus disorder prediction 1 20 - -
Seca12g00085 583 Coils Coil 135 176 - -
Seca12g00085 583 Coils Coil 198 218 - -
Seca12g00085 583 Coils Coil 295 315 - -
Seca12g00085 583 Pfam Weak chloroplast movement under blue light 16 558 IPR008545 -
Seca12g00085 583 Coils Coil 387 453 - -
Seca12g00085 583 Coils Coil 237 290 - -
Seca12g00085 583 Coils Coil 323 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00085 Seca-Chr12 871675 874038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00085 - - aprc:113874625 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00085 12 871675 874038 Seca6g04338 6 111061325 111064436 PCT