Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04825 ATGAACCCTACTACATTTTTTGTACCAGGATTTCTGAAAGCAATTAATGATAATACAGAGCAAAGCTTTAGAAGTATAATGTCCGAGCCCTCTCCAGGCATTTTTGTATTTGAAATGTTTCAGCCACACTTTTGTGAGTTATTGCTGTCTGAGATTGAAAATTTTGACAAATGGGTGACTGAAACAAAATTTCGCATCATGCGTCCCAATACAATGAATAAATATGGTGCTGTTCTTGATGACTTTGGCCTTGAAACGATGCTTGACAAGCTTATGGATGGTTTCATTCGTCCTTTATCTAGAGTCTTCTTTGCAGAAGTTGGGGGAGCAACCCTGGATTCTCATCATGGATTTGTTGTTGAATATGGTAAAGACAAAGATGTTGACTTGGGTTTTCATGTGGATGACTCGGAAGTAACCTTGAATGTTTGCTTGGGCAAGCAATTTACTGGAGGGGAATTGTTTTTCCGGGGCACCCGGTGTGAGAAACATGTAAATACAGGAAGTCATTCAGAGGAGATCTTTGATTATTCCCATGTCCCTGGACGAGCTGTGCTTCATCGTGGTCGTCATCGGCATGGTGCTAGAGCTACAACATCTGGCCATCGGGTCAACCTACTTCTATGGTGCAGAAGTTCTGTCTTTAGAGAGATGAAACGGTATCAAAAAGATTTCTCCAACTGGTGCGGTGAGTGCAATCGTGTGAAAAAGGAAAGGCAGCGGTCCACAATTGCTGCTACCAGATTGGAATTGTTCAGGAGGGAAGGTGAATCTACTGCATAA 783 0.4215 MNPTTFFVPGFLKAINDNTEQSFRSIMSEPSPGIFVFEMFQPHFCELLLSEIENFDKWVTETKFRIMRPNTMNKYGAVLDDFGLETMLDKLMDGFIRPLSRVFFAEVGGATLDSHHGFVVEYGKDKDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSHSEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFREMKRYQKDFSNWCGECNRVKKERQRSTIAATRLELFRREGESTA. 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04825 260 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 113 212 IPR005123 -
Seca10g04825 260 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 2 249 - -
Seca10g04825 260 SMART p4hc 32 211 IPR006620 GO:0005506|GO:0016705|GO:0031418
Seca10g04825 260 Gene3D q2cbj1_9rhob like domain 32 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04825 Seca-Chr10 111078051 111082652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04825 - - gmx:100816390 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04825 10 111078051 111082652 Seca12g06955 12 161519592 161525940 ECH
Seca10g04825 10 111078051 111082652 Seca10g04825 10 111078051 111082652 ECH
Seca12g06955 12 161519592 161525940 Seca10g04825 10 111078051 111082652 PCT