Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03954 ATGGCTTCCATCGCGCCCACGTGCTCCCCCACCTCTCTTCAGCTCCGATTGGCCTTCAATGGCGCCAAATTCCCCTTCGCTCAGCGCTTGAGGCTGCCCAACCTGAACCCTCGGGTCCGCCCCCTCCGCGCTGCGCAAAATGGCAACGGGTTGGAATGGACCGGGTCGGACCGTAAGGTCGACGGGTTCTCGGGTTGGTCCGAGTCAGAGGGTGGAGAACTGCCCAATAGCTCCCAGAAGAAGGAATCATTTGGAGGAGTTGTGGGAGTAGGAGTGGCTGGAGTCCTTCTTCTTACAGGGCTTACTTTTGCTGCCTTATCTCTCAGCAAACGAACCAGTTCCAGACCAGAGCAACAAATGAAGCCCTTGACTACACAACAGGAGGTACTTTTGTCTTCTGATGACCGTGATGGTGAAATTACAGAACAAGTAAATGCTGACAACAAGGTGGAACATGGAAATGGTAAAATGGAAGGTCAGATAGATATATCCAGGGATTATTCATCTCCTGAGTCTGATAATATTCAAAATGACTATAGAATTGTTGATGATTCTGATATAGGATCCCAGTTGGGATATGATAGTAAAAATACCTCCAATGGTATTGATGATGCCTCTAAACATATATCTGTTCAAGGAGAACAGCATGAGTCAGCTGTAGATGACAAGTTAGTTGTTCCTAGTGAAAGCCCAATTCCACTTGAATCTGAAAATACTGTTGATTCTTTTAATGCTTATGGATTTAGAGATTTTGATAGCAACTCTGTTGTAGATACAGCAGAATCTACTGCTGATCTTAAGGAAAACCTATTTAATGTTGAACCAGGAAACATACCCAACTATGATGCTAAGCCACTATCCCTTAATGCTGAGCAGCAGGATGAAATAGCCGGTTCAAGTGGTAGTGGAAGTTCTGATATTTCCAAAACCTCTTCTAGTTTGGGTGCTGATAATGAGACTGAAATTGTTAGTATTGTGGTCAATCCTGAGTCAAATAACACAATTTCAGATCCTAAGATTTTTACTGAAGATGATCAAGAGAATATTCTATCAGCTTTGAAGAAAGAAAACCTTGACCTGAACAAAATTGCACAGGTCTCATCTGAGGGAAATAAGTCATCCTTCGAAGAGCAGAGTATTCCTGGAAATGAACTGTTTGGAAAATCATTGGTCTCATCATCAACCAATTCATCGGTAGATGAGCAGGTTAGAAATGATAATAATGAGGTTAATAAAGCTAGAACTGAATCTCCAGATTCTGGATCCCTTTTCTCTGCTCCTGGCATTCCTGCTCCATCAGTAGTTTCTGCAGCTGTACAGGTGCCTCCTGGAAAGGTTTTGGTTCCTGCAGCTGTTGATCAGGCTCAAGGGCAAGCACTAGCTGCATTGCAAGTTTTAAAGGTCATTGAGTCTGATGTTCAACCTGGTGATTTATGCACACGTCGTGAATATGCTCGCTGGTTGGTGTCTGCTAGCAGTGCTCTTTCAAGGAGCACAATTTCAAAAGTGTATCCTGCCATGTACATAGGGAATGTTACTGAGCTTGCATTTGATGATATCACCCCTGAGGACCCTGATTTTTCTTCCATTCAAGGCTTGGCAGAAGCTGGACTTATTGAAAGCAGGCTTTCAAGACGTGATATACAGTTGTCTGCTGATGAAGACGATGACCCATTTTATTTCTCCCCTGAAAGCCCTTTATCACGTCAGGATCTTGTCAGTTGGAAAATGGCCCTAGAGAAAAGACAGCTTCCTGAAGCTGACAGAAAGATGCTGTACCAACTTTCTGGTTTTATAGACACCGATAAGATACATCCTAATGCATGCCCTGCACTAGTAGCTGACCTGTCTGCTGGGGAGCATGGAATAATAGCTCTTGCATTTGGTTATACACGATTGTTCCAGCCAGATAAACCAGTAACAAAAGCCCAAGCAGCTATTGCCCTTGCTACTGGAGATGCTTCTGACATAGTTAGTGAAGAACTTGCACGCATTGAAGCAGAATCTATTGCTGAAAATGCTGTCGCTGCACACAGTGCTTTAGTAGCTCAAGTTGAGAAGGATATCAATGCAAGTTTTGAGCAGGAGCTTTTCATAGAGAGGGAAAAGATTAATGCTATTGAAAGAATGGCCGAAGAGGCAAGACTTGAGCTGGAAAGGTTAAGAGCTGAGAGAGAAGAAGATAATGTTGCCTTGGTGCAAGAACATGCTGCTATTGAATCAGAAATGGAGGTCTTTTCAAAGTTAAGGCATGAGGTTCAGGACCAATTACAAAGCCTCATGAATAACAAGGTAGAAATAGCATATGAAAAAGAGAGGATCAGAAAGCTTCGGGAGCAAGCGGAAGTTGAAAATAGCGAGATTGGCCGTTTACAGTATGAGCTAGAGGTTGAACGAAAAGCCTTGTCAATGGCCAGGGCTTGGGCAGAGGATGAGGCCAAACGAGTAAGAGAACAAGCAAGAGCCTTAGAGGAGGCCAGAGATCGTTGGGAGAGGCATGGAATCAAAGTGGTAGTTGATGACGACCTCCGCAAGGAGGCCTCTGCTGAAGTTACATGGCTCAATGCTGGAGAGCAGTTCTCAGTTCAAGGAACAGTTGATAGGGCTGAGAGCTTATTGGACAAGCTCAAAAAAATGGGTGCAGATATTAGAGGAAAATCTAGAGATACAATTGACAAGATCATCCACATGGTTTCCCTATTTATATCAAAATTGAAGGAATGGGTATCCAAAACTGGAAAACATGCTGAAGAATTAGGAGAAGCTGTCGTCTCAAAAGCAGGTAAGTCGGCCAATGAGTTGCAGCAGAATGCCCTTGAATTTGGATTTGCTATCAAAGAAGGTGCAAAGCGAGTTGCTGGTGATTGTAGGGAAGGAGTTGAGAAAATCACCCAAAAGTTCACTCAAAAGTTCAAGACCTGA 2922 0.4367 MASIAPTCSPTSLQLRLAFNGAKFPFAQRLRLPNLNPRVRPLRAAQNGNGLEWTGSDRKVDGFSGWSESEGGELPNSSQKKESFGGVVGVGVAGVLLLTGLTFAALSLSKRTSSRPEQQMKPLTTQQEVLLSSDDRDGEITEQVNADNKVEHGNGKMEGQIDISRDYSSPESDNIQNDYRIVDDSDIGSQLGYDSKNTSNGIDDASKHISVQGEQHESAVDDKLVVPSESPIPLESENTVDSFNAYGFRDFDSNSVVDTAESTADLKENLFNVEPGNIPNYDAKPLSLNAEQQDEIAGSSGSGSSDISKTSSSLGADNETEIVSIVVNPESNNTISDPKIFTEDDQENILSALKKENLDLNKIAQVSSEGNKSSFEEQSIPGNELFGKSLVSSSTNSSVDEQVRNDNNEVNKARTESPDSGSLFSAPGIPAPSVVSAAVQVPPGKVLVPAAVDQAQGQALAALQVLKVIESDVQPGDLCTRREYARWLVSASSALSRSTISKVYPAMYIGNVTELAFDDITPEDPDFSSIQGLAEAGLIESRLSRRDIQLSADEDDDPFYFSPESPLSRQDLVSWKMALEKRQLPEADRKMLYQLSGFIDTDKIHPNACPALVADLSAGEHGIIALAFGYTRLFQPDKPVTKAQAAIALATGDASDIVSEELARIEAESIAENAVAAHSALVAQVEKDINASFEQELFIEREKINAIERMAEEARLELERLRAEREEDNVALVQEHAAIESEMEVFSKLRHEVQDQLQSLMNNKVEIAYEKERIRKLREQAEVENSEIGRLQYELEVERKALSMARAWAEDEAKRVREQARALEEARDRWERHGIKVVVDDDLRKEASAEVTWLNAGEQFSVQGTVDRAESLLDKLKKMGADIRGKSRDTIDKIIHMVSLFISKLKEWVSKTGKHAEELGEAVVSKAGKSANELQQNALEFGFAIKEGAKRVAGDCREGVEKITQKFTQKFKT. 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03954 973 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 10 967 - -
Seca10g03954 973 MobiDBLite consensus disorder prediction 150 176 - -
Seca10g03954 973 Coils Coil 806 833 - -
Seca10g03954 973 MobiDBLite consensus disorder prediction 386 404 - -
Seca10g03954 973 MobiDBLite consensus disorder prediction 386 425 - -
Seca10g03954 973 MobiDBLite consensus disorder prediction 292 316 - -
Seca10g03954 973 Coils Coil 767 794 - -
Seca10g03954 973 MobiDBLite consensus disorder prediction 62 81 - -
Seca10g03954 973 Coils Coil 704 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03954 Seca-Chr10 84353549 84360270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03954 - - gmx:100780360 1347.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03954 10 84353549 84360270 Seca10g03948 10 84294888 84297625 PCT