Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03948 ATGTACACAGGGAATGTTACTGAGCTTGCATTTGATGATATCACCCCTGAGGACCCTGATTTTTCTTCCATTCAAGGCTTGGCAGAAGCTGGACTTATTGAAAGCAGGCTTTCAAGACGTGATATACAGTTGTCTGCTGATGAAGACGATGGCCCATTTTATTTCCACCCTGAAAGCCCTTTATCACGTCAGGATCTTGTCAGTTGGAAAATGGCCCTAGAGAAAAGACAGCTTCCTGAAGCTGACAGAAAGATGCTGTACCAACTTTCTGGTTTTATAGACACCGATAAGATACATCCTAATGCATGCCCTGCACTAGTAGCTGACCTGTCTGCTGGGGAGCATGGAATAATAGCTCTTGCATTTGGTTATACACGATTGTTCCAGCTAGATAAACCAGTAACAAAAGCCCAAGCAGCTATTGCCCTTGCTACTGGAGATGCTTCTGACATAGTTAGTGAAGAACTTGCACGCATTAAAACAGAATCTATTGCTGAAAATGCTGTCGCTGCACACAGTGCTTTAGTAGCTCAAGTTGAGAAGGATATCAATGCAAGTTTTGAGCAGGAGCTTTTCATAGAGAGGGAAAAGATTAATGCTATTGAAAGAATGGCTGAAGAGGCAAGACTTGAGTTGGAAAAGTTAAGGGCTGAGAGAGAAGAAGATAATGTTGCCTTGGTGCAAGAACGTGCTGCTATTGAATCAGAAATGGAGGTCTTTTCAAAGTTAAGGCATGAGGATGAGGCCAAACGAGTAAGAGAAGAAGCAAGAGCCTTAGAGGAGGCCAGAGATCGTTGGGAGAGGCATGGAATCAAAGTGGTAGTTGATGACGACCTCCGCAAGGAGGCCTCTGCTGAAGTTACATGGCTCAATGCTGGAGAGCAGTTCTCAGTTCAAGGAACAGTTGATAGGGCTGAGAGCTTATTGGACAAGCTCAAAAAAATGGGTGCAGATATTAGAGGAAAATCTAGAGATACAATTGACAAGATCATCCACATGGTTTCCCTATTTATATCAAAATTGAAGGAATGGGTTTCCAAAACTGGAAAACATGCTCAAGAATTAGGAGAAGCTGTCGTCTCAAAAGCAGGTAAGTCAGCCAATGAGTTGCAGCAGAATGCCCTTAAATTTGGATTTGCTATCAAAGAAGGTGCAAAGCGAGTTGCTGGTGATTGTAGGGAAGGAGTTGAGAAAATCACCCAAAAGTTCACTCAAAAGTTCAAGACCTGA 1230 0.4301 MYTGNVTELAFDDITPEDPDFSSIQGLAEAGLIESRLSRRDIQLSADEDDGPFYFHPESPLSRQDLVSWKMALEKRQLPEADRKMLYQLSGFIDTDKIHPNACPALVADLSAGEHGIIALAFGYTRLFQLDKPVTKAQAAIALATGDASDIVSEELARIKTESIAENAVAAHSALVAQVEKDINASFEQELFIEREKINAIERMAEEARLELEKLRAEREEDNVALVQERAAIESEMEVFSKLRHEDEAKRVREEARALEEARDRWERHGIKVVVDDDLRKEASAEVTWLNAGEQFSVQGTVDRAESLLDKLKKMGADIRGKSRDTIDKIIHMVSLFISKLKEWVSKTGKHAQELGEAVVSKAGKSANELQQNALKFGFAIKEGAKRVAGDCREGVEKITQKFTQKFKT. 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03948 409 Coils Coil 198 230 - -
Seca10g03948 409 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 1 246 - -
Seca10g03948 409 Coils Coil 242 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03948 Seca-Chr10 84294888 84297625 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03948 - - lja:Lj2g3v0371740.1 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03948 10 84294888 84297625 Seca10g03948 10 84294888 84297625 ECH
Seca10g03954 10 84353549 84360270 Seca10g03948 10 84294888 84297625 PCT