Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03932 ATGGCACTGGCTCCTATTCCAGATGTGGTCCTAGGTTCAATTGCCTTTGCAATCTTCTGGGTCTTAGCAGTTTTCCCAGCTGTGCCTTTTTTACCCATTGGGAGAACTGCAGGGTCCCTGCTAGGTGCAATGCTTATGGTCATATTCCAAGTTCTTAGTCCAGATGAAGCTTATGCTGCAATTGATCTCCCAATTCTTGGTCTTCTTTTTGGGACAATGGTGGTCAGTGTTTATCTTGAAAGGGCAGACATGTTTAAATACATAGGAAAATTGCTCTCTTGGAAAAGCAGAGGAGCAAAGGACTTGCTTTGCAGAATCTGTCTGATTTCTGCATTATCAAGTGCTCTTTTCACCAATGACACCTCTTGTGTTGTTTTGACTGAATTCATATTGAAAATTGCAAAAAAGAATAACCTCCCACCCCATCCTTTCCTACTTGCACTTGCTACAAGTGCTAATATTGGGTCCTCAGCAACTCCAATTGGCAACCCCCAAAATCTTGTTATAGCTGTTCAGAGTAAAATGTCATTTGGGAAGTTTTTGACTGGTATTCTTCCAGCTATGCTTGTAGGAGTGGTAGTGAATGCTGTAATGCTTATAACCATGTATTGGAGGTCATTAACTACTCATAAGGATGAAGAGTATCCAATTGCAGAAGTTGTAGTAGAAGGGGAGGTTAATTCCCATCAGTTTTCTCCAGCTACAATGTCTTATTTTCCATCCTTTAATTCTCAAGAAAGGAATGCATGTCCAAAATCTACTAATGTTCAAAACTGTTCTCAAGTCCAGACTCTAAGAAACCAATCAACTCCTAGTGAAAGTGAAACTCAGAAGGTTCTTAGAAGCACATTGGAATCCCCAAGAAACTCAAATGCATCAAAGGAGGGGACAAATGACATGCCTTTTCAGAAAAAGGAGGAAACTAATCCTTCAAAAATTGTTGCAGCAGAGGATAAACCAAGAGAAGCACATTTTATACTTATGCTCTTTTCAGAAAAAAAGGACAATATAATCATAAAATGGAAAAGGGGACTGTGGAAATCTTGTGTTTACACTATCACATTAGCAATGTTGGTTGCTATGCTTCTAGGTGTAAATATGTCATGGACAGCAATTGCAGCTGCACTAGCTTTGGTGGTTCTTGATTTCAAAGATGCTAGGCCATGCTTAGAGAAGGTTTCATATTCACTTTTGATATTCTTTTGTGGAATGTTTATCACAGTAGATGGCTTCAACAAAACTGGAATTCCAAGTGCTCTGTGGGACTTGATGGAGCCTTATTCTCAAGTAGATCATGCTAGTGGAATTGCAATATTTGCTGTAGTTATACTAGTTCTATCAAATTTAGCTTCAAATGTACCAACTGTTCTATTGCTTGGAGCACGTGTTGCTGCTTCAGCTGCTGCAATTTCCAAAGAAAATGAAAAAAAGGCTTGGCTCATGTTGGCATGGGTTAGCACAGTAGCAGGGAACTTGTCACTATTGGGATCTGCTGCAAATATGATAGTATGTGAACAAGCTCGCCGAGCTCCAAACCTTGGATACACATTAACCTTTTGGAGCCATCTCAAATTTGGCCTTCCTTCCACTCTTATAGTCACTGCTATTGGTTTGACACTGATTAGATGA 1629 0.3978 MALAPIPDVVLGSIAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVIFQVLSPDEAYAAIDLPILGLLFGTMVVSVYLERADMFKYIGKLLSWKSRGAKDLLCRICLISALSSALFTNDTSCVVLTEFILKIAKKNNLPPHPFLLALATSANIGSSATPIGNPQNLVIAVQSKMSFGKFLTGILPAMLVGVVVNAVMLITMYWRSLTTHKDEEYPIAEVVVEGEVNSHQFSPATMSYFPSFNSQERNACPKSTNVQNCSQVQTLRNQSTPSESETQKVLRSTLESPRNSNASKEGTNDMPFQKKEETNPSKIVAAEDKPREAHFILMLFSEKKDNIIIKWKRGLWKSCVYTITLAMLVAMLLGVNMSWTAIAAALALVVLDFKDARPCLEKVSYSLLIFFCGMFITVDGFNKTGIPSALWDLMEPYSQVDHASGIAIFAVVILVLSNLASNVPTVLLLGARVAASAAAISKENEKKAWLMLAWVSTVAGNLSLLGSAANMIVCEQARRAPNLGYTLTFWSHLKFGLPSTLIVTAIGLTLIR. 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03932 542 PANTHER TRANSPORTER ARSB-RELATED 1 541 - -
Seca10g03932 542 CDD YbiR_permease 28 541 - -
Seca10g03932 542 MobiDBLite consensus disorder prediction 263 298 - -
Seca10g03932 542 Pfam Citrate transporter 27 489 IPR004680 GO:0016020|GO:0055085
Seca10g03932 542 MobiDBLite consensus disorder prediction 263 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03932 Seca-Chr10 83546551 83549726 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03932 - - gmx:100818695 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03930 10 83528477 83533308 Seca10g03932 10 83546551 83549726 ECH
Seca10g03932 10 83546551 83549726 Seca10g03932 10 83546551 83549726 ECH
Seca10g03932 10 83546551 83549726 Seca10g03932 10 83546551 83549726 PCT
Seca10g03932 10 83546551 83549726 Seca10g03930 10 83528477 83533308 PCT