Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03930 ATGGCACTGGCTCCTATTCCAAAAGTTATCCTAGGTTCAATTGCCTTTGCAATCTTCTGGGTATTAGCAGTTTTCCCAGCTGTGCCTTTTCTACCCATTGGGAGAACTGCAGGTTCACTGCTAGGTGCAATGCTTATGGTTATATTCCGAGTTCTTAGTCCAGATGAAGCTTATGCTGCAATTGATCTCCCAATTCTTGGTCTTCTTTTTGGAACAATGGTTGTCAGTGTTTATCTTGAAAGAGCAGACATGTTTAAATACATAGGGAAATTGCTCTCTTGGAAAAGCACAGGAGCAAAGGACTTGCTTTGTAGAATCTGTCTGATTTCTGCTTTATCAAGTGCTCTTTTCACCAATGACACCTCTTGTGTTGTTTTGACTGAATTCATATTGAAAATTGCAAGGCAGCACAACCTCCCACCCCATCCTTTCTTACTTGCACTTGCTTCAAGTGCTAATATTGGGTCCTCAGCAACTCCAATTGGCAACCCCCAAAATCTTGTTATAGCTGTTCAGAGTAAAATATCATTTGGAACATTTCTGACTGGTATTCTTCCAGCTATGCTAGTAGGAGTTGTAGTGAATGCTTTATTTCTTATAACTATGTATTGGAGGTTGTTATCTATTCATAAGGATGAAGAAGATCCAGTTTCTGATGTTGCAGCAGAAGAAGAGGTTAATTCCCATCAGTTTTCTCCAGCCACAATGTCTCATTTTACGTCCTTTAATTCCCAAGAATGGAATGCTTGTCTAGACTCTAGCAGTATTCAAAACTCTCCTCAAGTTCAGACTCTAAGAAACAGATCAACTCCTGGTGATGGTGAATTTCACAGGGTTCTCAGTAACTCACCGGATTCCACAAAAAACTCAAATGCATCAAAGGAGGGCATCAATGATTTGCCTTCTCAGAGAAAGGAGGAAACTAATCCTTCAACAGCTGTTGCATCAGTAGATAAACCAATACAAGAACATATTATGTACTCTTCAGAAGGAAAGAACTATATGAACATAAAATGGAAAAGAATACTGTGGAAATCTTGTGTTTACATTATCACACTAGGAATGTTGATTGCAATGCTTCTAGGTTTAAATATGTCATGGACTGCAATTTCAGCTGCACTAGCTTTGGTGATTCTTGATTTCAAAGATGCTAGGCCATGCTTAGAGAAGGTTTCATATTCACTTTTGATATTCTTTTGTGGGATGTTTATCACAGTAGATGGCTTCAACAAAACTGGAATTCCAAGTGCTCTTTGGGACTTGATGGAGCCTTATTCTCAAGTTGATCATGCTAGTGGAATAGCAATACTTGCTTTAGTTATACTTGTCCTATCAAATTTGGCTTCAAATGTACCAACTGTTTTATTGCTTGGAGCAAGAGTTGCAGCTTCAGCTGCTGCAGTTTCCAAAGAAGATGAGAAAAAGGCATGGCTCATCTTGGCATGGGTCAGCACCATAGCAGGGAACCTGTCACTATTAGGATCAGCTGCCAACTTGATAGTGTGTGAACAAGCTCGCCGAGCTCCAAACCTTGCATACACATTAACCTTCTGGAGCCATCTCAAATTTGGCCTCCCTTCCGCTCTTATAATCACTGCTATTGGTTTGACTCTCATAAGATGA 1623 0.3993 MALAPIPKVILGSIAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVIFRVLSPDEAYAAIDLPILGLLFGTMVVSVYLERADMFKYIGKLLSWKSTGAKDLLCRICLISALSSALFTNDTSCVVLTEFILKIARQHNLPPHPFLLALASSANIGSSATPIGNPQNLVIAVQSKISFGTFLTGILPAMLVGVVVNALFLITMYWRLLSIHKDEEDPVSDVAAEEEVNSHQFSPATMSHFTSFNSQEWNACLDSSSIQNSPQVQTLRNRSTPGDGEFHRVLSNSPDSTKNSNASKEGINDLPSQRKEETNPSTAVASVDKPIQEHIMYSSEGKNYMNIKWKRILWKSCVYIITLGMLIAMLLGLNMSWTAISAALALVILDFKDARPCLEKVSYSLLIFFCGMFITVDGFNKTGIPSALWDLMEPYSQVDHASGIAILALVILVLSNLASNVPTVLLLGARVAASAAAVSKEDEKKAWLILAWVSTIAGNLSLLGSAANLIVCEQARRAPNLAYTLTFWSHLKFGLPSALIITAIGLTLIR. 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03930 540 PANTHER TRANSPORTER ARSB-RELATED 1 539 - -
Seca10g03930 540 CDD YbiR_permease 28 539 - -
Seca10g03930 540 MobiDBLite consensus disorder prediction 258 315 - -
Seca10g03930 540 Pfam Citrate transporter 27 487 IPR004680 GO:0016020|GO:0055085
Seca10g03930 540 MobiDBLite consensus disorder prediction 280 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03930 Seca-Chr10 83528477 83533308 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03930 - - gmx:100818695 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03930 10 83528477 83533308 Seca10g03932 10 83546551 83549726 ECH
Seca10g03930 10 83528477 83533308 Seca10g03930 10 83528477 83533308 ECH
Seca10g03932 10 83546551 83549726 Seca10g03930 10 83528477 83533308 PCT