Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03850 ATGAAGGCAGTCTCTGGCCGTTCAGGGGTTGAGTCAGTCTCTGTGGACATGAAGGATCAGAAAATGACTTTAATTGGGGACATAGACCCTGTTCGTGTAGTGGGAAAGCTGAGGAAATTGTGTCATGCTGAAATACTTTCAGTTGGACCAGCCAAAGAGGAGAAGAAGGAGGAGAAGAAGCCAGAGGAAAAGAAAAAGGATCCAAAGGAGGAATTGGCTGAACTTGTTAAGACCTATGAAGCATATTATAATCAGATGAGACTGCCACAACCACATTACTATTACACAACTGTGGAAGAGAATCCTAATGGCTGCACTATTTGCTAA 327 0.4312 MKAVSGRSGVESVSVDMKDQKMTLIGDIDPVRVVGKLRKLCHAEILSVGPAKEEKKEEKKPEEKKKDPKEELAELVKTYEAYYNQMRLPQPHYYYTTVEENPNGCTIC. 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03850 108 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 105 - -
Seca10g03850 108 SUPERFAMILY HMA, heavy metal-associated domain 2 40 IPR036163 GO:0046872
Seca10g03850 108 ProSiteProfiles Heavy-metal-associated domain profile. 1 49 IPR006121 GO:0046872
Seca10g03850 108 Pfam Heavy-metal-associated domain 1 39 IPR006121 GO:0046872
Seca10g03850 108 Gene3D - 1 54 - -
Seca10g03850 108 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03850 Seca-Chr10 80347090 80347733 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03850 - - gmx:100306444 130.568
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03850 10 80347090 80347733 Seca10g03850 10 80347090 80347733 ECH
Seca10g03851 10 80405325 80406010 Seca10g03850 10 80347090 80347733 PCT
Seca10g03850 10 80347090 80347733 Seca10g03849 10 80315490 80316296 PCT