Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03849 ATGAAGTCAGTCTCTGGCCTTTCAGGGGTTGAGTCAGTCTCAGTGGACATGAAGGACCAAAAGATGACTATAATTGGAGACATAGACACTGTTCACATAGTGGAGAAGCTGAGGAAATTTTGTCATGCTGATATACTTTCAGTTGGACCAGCCAAAGAAGAGAAGAAAGAGGAGAAGAAGCCAGAGGAAAAGAAAAAGGATCCAAAGGAGGAATTGGCTGAACTCGTGAAGACCTATGAAGCATATTATAATATTAATCAGATGAGACTGCCACAACCATATTACTATTACACACCTGTGGAAGAGAATCCTGATGGCTGCACTATCTGCTAA 333 0.4144 MKSVSGLSGVESVSVDMKDQKMTIIGDIDTVHIVEKLRKFCHADILSVGPAKEEKKEEKKPEEKKKDPKEELAELVKTYEAYYNINQMRLPQPYYYYTPVEENPDGCTIC. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03849 110 CDD HMA 2 39 IPR006121 GO:0046872
Seca10g03849 110 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 104 - -
Seca10g03849 110 Pfam Heavy-metal-associated domain 1 39 IPR006121 GO:0046872
Seca10g03849 110 SUPERFAMILY HMA, heavy metal-associated domain 2 40 IPR036163 GO:0046872
Seca10g03849 110 ProSiteProfiles Heavy-metal-associated domain profile. 1 49 IPR006121 GO:0046872
Seca10g03849 110 MobiDBLite consensus disorder prediction 50 70 - -
Seca10g03849 110 Gene3D - 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03849 Seca-Chr10 80315490 80316296 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03849 - - gmx:100306444 122.864
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03849 10 80315490 80316296 Seca10g03849 10 80315490 80316296 ECH
Seca10g03850 10 80347090 80347733 Seca10g03849 10 80315490 80316296 PCT