Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03743 ATGGCTTCCACAAAACAAGCATCAACATCCCTCCTCTTGGCCCTTATAACCCTCTCTTTCATAATCAACAACTCCTCCAACGCTGCTGATTGCGTTGGCAGCGGAGCCATTTCAGTGTACTGGGGTCAATCACCCACTACCAGTGAAGAAGAGGGTACCTTGCGTGAGGCATGTGAGTCTCAAAATTACGATATCGTCATCCTTGAAGGACTTGTCGTCCACGACGATGGCAGCACCCCAACGCTAAACTTGCAAAACCATTGTGGCACTGAACAACACCCTTGCACCGAGCTACAGTCAGAAATAGAATACTGCCAAAAGGAGAAGAATATCAAAGTCTTCCTTTCCATTATGGAGGACGATCCAACCACTCCCAAACCCGAACCATCTGAAAATGAAGCAAAGGAACTTGCTGACTACCTCTTGAAGAACTACCTGAGTGGACAGCCTGGTCCATTGGGGAGTGTAACTTTGGATGGCATTGACATTGGGGACGTTTCAGATAGTTCACACCTGAAATGGGCTGAAGTTGTTAAGGCCATTAATGCATCCACAACAGAAAGGAAAATTTATTTATCTGCATCTCCACAATGTTGTGTGTACCCTGATGCCTACCTTGACGCCGCAATTAAAACTGGCCTTTTGGATTATGTCTATGTTGAGTTCTTCAACTTCAACCCTGATTGCATCTACTCTAATGGAGATGCTACCAAACTTTTGAATGCTTGGAAAACGTGGACCTCTCAAGTTCCCAACAGCCTAATATTTTTGGGTCTTCTTGCGTCTTCTCATGAAGTGGCACAAGGCGGTTATATATTACCGGAAGATCTCAAATCTAAAGTTCTGCCAACCGTGAAGGAGGCTTCCAACTATGGTGGAGTCATGATTTGGAACAGGTTTTATGATAAAAAAGAGAACTACACTGCTCAGATAAAAGACAGTGTCAAAAAGGTTTGTCGATGTGTGTGTGATGAGCCAGCATCGACTAGTTTCTATGGTCTACTTGGATCCATGTGA 1017 0.4444 MASTKQASTSLLLALITLSFIINNSSNAADCVGSGAISVYWGQSPTTSEEEGTLREACESQNYDIVILEGLVVHDDGSTPTLNLQNHCGTEQHPCTELQSEIEYCQKEKNIKVFLSIMEDDPTTPKPEPSENEAKELADYLLKNYLSGQPGPLGSVTLDGIDIGDVSDSSHLKWAEVVKAINASTTERKIYLSASPQCCVYPDAYLDAAIKTGLLDYVYVEFFNFNPDCIYSNGDATKLLNAWKTWTSQVPNSLIFLGLLASSHEVAQGGYILPEDLKSKVLPTVKEASNYGGVMIWNRFYDKKENYTAQIKDSVKKVCRCVCDEPASTSFYGLLGSM. 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03743 338 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 35 318 IPR001223 GO:0005975
Seca10g03743 338 Gene3D Glycosidases 35 313 - -
Seca10g03743 338 Pfam Glycosyl hydrolases family 18 38 302 IPR001223 GO:0005975
Seca10g03743 338 PANTHER ENDOCHITINASE 12 312 - -
Seca10g03743 338 SUPERFAMILY (Trans)glycosidases 33 311 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03743 Seca-Chr10 74303614 74307574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03743 10 315 Glycoside Hydrolase AT5G24090 37.217 2.44e-62 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03743 K01183 - gmx:547449 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03743 10 74303614 74307574 Seca8g07317 8 169818889 169819779 PCT