Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02463 ATGGCAAAAGTTTGTTGGCCATATTTTGATCCAGAGTATGAGAACTTCAGCAATAGAATCAACCCTCCAAGGGTCTCTATGGACAATGATAGTTGCCCTGATTGTACACTGCTCAAGATTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTCGTGCAAATATTGACAGATCTTGACTTCATAATTACCAAAGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGTATTTCATGTCACGGATCAACAAGGAAAGAAGATAACAGACAGCAAAACTATTGACTTCATTGAAAAGGCTCTAGGACCAAAGGGCCAGAGCACAGAAGGGGTGAAGAGTTGGGCAGGCAAACGGGTTGGTGTGCACTCTGTTGGTGATCATACAGCCATTGAGCTCATTGGTAGGGACCGTCCAGGTCTCTTGTCTGAGATATCAGCTGTCCTTGCCAGCCTCCAAATTAATGTGATTGCAGCTGAAGTTTGGACTCATAAAAGTCGAATAGCTTGTGTCCTTTATGTCAATGATGCTACAAACCAAGCAGTGGATGACCCAAAAAAACTGTCTATCATGGAGGAGCAGCTCAAGCACATCCTACGTGGATGTGAGGATGATGAGAAAGTGGCTCGGACCAGTTTCTCTATGGGTTTCACCCATATGGATAGGCGGCTCCACCAAATGTTGTTTGCTGATAGGGATTATGAAAGTGCTGGGGTAACAACCACAGATGTTGATTGTCCTCCATCTTTCAGGCCAAAAATCAGGATAGAACGTTGTGAGGAAAAAGGTTACTCAGTGCTTAGTGTGAGATGCAAAGATCGGGCAAAGTTGATGTTTGACATTGTTTGCACTCTCACTGACATGCAATATGTTGTTTTCCATGCAACAATCTCATCAGAAGGGCCTTATGCATCCCAGGAGTACTTCATCCGACACATGGATGGATGTACGCTTGATACTGAAGGAGAGAAAGAAAGGGTCATCAAATGCATTGAAGCTGCTATTCAAAGAAGAGTAAGCGAGGGTGTGAGCCTTGAGCTATGTGCAAAGGATAGAGTTGGCTTGCTGTCTGAAGTAACTAGGATTCTACGAGAGAATGGCTTGACTGTATCTAGGGCCGGTGTATCAACCATAGGAGAGAAAGGACTAAATGTCTTCTATGTTAGAGATGCATATGGGAACCCTGTGGATATGAAGATCATTGAAGAACTACGTAAAGAAATTGGACAGACTGTGATGGTAAATGTGAAGAGGGTACCATCAAATGCCAGAGCACCAGAAACCCGAGGATGGGCCAAAATAAGCTTCTTCTTTGGGAACTTGTTGGAAAGGTTCTTGACTTGA 1344 0.4353 MAKVCWPYFDPEYENFSNRINPPRVSMDNDSCPDCTLLKIDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKGQSTEGVKSWAGKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLASLQINVIAAEVWTHKSRIACVLYVNDATNQAVDDPKKLSIMEEQLKHILRGCEDDEKVARTSFSMGFTHMDRRLHQMLFADRDYESAGVTTTDVDCPPSFRPKIRIERCEEKGYSVLSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVSRAGVSTIGEKGLNVFYVRDAYGNPVDMKIIEELRKEIGQTVMVNVKRVPSNARAPETRGWAKISFFFGNLLERFLT* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02463 447 SUPERFAMILY ACT-like 340 409 IPR045865 -
Rops9g02463 447 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
Rops9g02463 447 ProSiteProfiles ACT domain profile. 344 421 IPR002912 -
Rops9g02463 447 CDD ACT_ACR_4 342 413 - -
Rops9g02463 447 SUPERFAMILY ACT-like 32 106 IPR045865 -
Rops9g02463 447 Pfam ACT domain 344 407 IPR002912 -
Rops9g02463 447 Pfam ACT domain 37 85 IPR002912 -
Rops9g02463 447 Pfam ACT domain 130 188 IPR002912 -
Rops9g02463 447 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Rops9g02463 447 CDD ACT_ACR_3 264 338 - -
Rops9g02463 447 SUPERFAMILY ACT-like 125 200 IPR045865 -
Rops9g02463 447 CDD ACT_ACR_1 35 106 - -
Rops9g02463 447 Gene3D - 128 208 - -
Rops9g02463 447 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 10 417 IPR040217 -
Rops9g02463 447 Gene3D - 339 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02463 Rops-Chr9 45784776 45793039 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02463 - - gmx:100789044 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02463 9 45784776 45793039 Rops9g02463 9 45784776 45793039 ECH
Rops9g02463 9 45784776 45793039 Rops10g01995 10 36381639 36388543 PCT