Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01995 ATGGCTACAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAATAGAATCAACCCTCCAAGGGTCTCTGTGGACAATGATAGTTGCCATGATTGCACACTGATCAAGGTTGACAGCGTTAACAAACCTGGAATTCTGCTGGAAGTTGTGCAAATCTTGACAGACCTCGACTTCATAATTACCAAAGCTTACATATCTTCTGATGGGGGATGGTTTATGGATGTATTTCATGTCACGGATCAACAAGGAAAAAAGATAACAGATAGCAAAACCATTGACTTTATTGAAAAGGCGCTAGGACCAAAGAGCCAGAGCAAAGAAGGAGTGAAGAATTGGCCAGGCAAACGGGTTGGAGTGCATTCTGTTGGTGATCATACAGCCATTGAGCTTATTGGCAGAGACCGCCCAGGTCTCTTGTCTGAGATCTCAGCAGTCCTCGCTAACCTCCATTTTAACGTGGTTGCAGCCGAAGTTTGGACTCATAACAGCCGAATAGCTTGTGTCCTTTATGTCAATGATGCTACAAGAGAAGCTGTGGATGATCCAAACAGATTGTCTCTTGTGGAGGAGCAGCTCAACAACATCTTACGTGGATGTGAGGATGGTGAGAAAGTTGCTAGGACCAGTCTCTCCATGGGTTTCACACATATGGATAGGAGGCTCCACCAAATGTTGTTTGCTGATCGGGATTATGAGAGTTATGGAGTAACATCAGACGTTGATTGTCTTCCCTCTTTCAGGCCAAAAATCACAGTAGAACGTTGTGAGGAGAAAGGGTACTCAGTGGTTAGTGTAAGGTGCAAAGATCGGGCAAAACTCATGTTTGACATTGTTTGTACTCTTACAGATATGCAATATGTTGTTTTCCATGCCACGATCTCATCAGATGGCCCTTATGCATCCCAGGAGTACTTTATTCGGCACATGGATGGATGCACACTTGATACTGAAGGAGAAAAAGAAAGGGTCATCAAATGCATTGAAGCTGCTATTCGAAGAAGAATAAGCGAGGGTGTGAGCCTTGAGCTATGTGCAAAGGATAGAGTGGGGTTGCTATCTGACGTAACAAGGATTCTGAGAGAGAATGGCCTAACAGTTTGTAGGGCAGGTGTATCAACAAGAGGGGAGCAATCGCTGAATGTATTCTATGTGAGGGATGCATCAGGGAACCCAGTGGACATGAAAACTATAGAAGCACTTCGTAAAGAAATAGGTAAGACAATGATGGTGGATGTGAAGAGGGTACCAACCAATGCTAAAGCACCAGAGACAAGAGGATGGGCTAAAACTAGTTTCTTCTTTGGTAACTTGTTGGAAAGGTTCTTGACTTGA 1341 0.4385 MATVCWPYFDPEYENFSNRINPPRVSVDNDSCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKSQSKEGVKNWPGKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLHFNVVAAEVWTHNSRIACVLYVNDATREAVDDPNRLSLVEEQLNNILRGCEDGEKVARTSLSMGFTHMDRRLHQMLFADRDYESYGVTSDVDCLPSFRPKITVERCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIRRRISEGVSLELCAKDRVGLLSDVTRILRENGLTVCRAGVSTRGEQSLNVFYVRDASGNPVDMKTIEALRKEIGKTMMVDVKRVPTNAKAPETRGWAKTSFFFGNLLERFLT* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01995 446 ProSiteProfiles ACT domain profile. 130 210 IPR002912 -
Rops10g01995 446 CDD ACT_ACR_4 341 412 - -
Rops10g01995 446 Gene3D - 128 210 - -
Rops10g01995 446 ProSiteProfiles ACT domain profile. 343 420 IPR002912 -
Rops10g01995 446 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Rops10g01995 446 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 6 416 IPR040217 -
Rops10g01995 446 Pfam ACT domain 37 85 IPR002912 -
Rops10g01995 446 Pfam ACT domain 130 199 IPR002912 -
Rops10g01995 446 SUPERFAMILY ACT-like 32 106 IPR045865 -
Rops10g01995 446 SUPERFAMILY ACT-like 125 200 IPR045865 -
Rops10g01995 446 Gene3D - 338 421 - -
Rops10g01995 446 CDD ACT_ACR_1 35 105 - -
Rops10g01995 446 CDD ACT_ACR_3 263 337 - -
Rops10g01995 446 SUPERFAMILY ACT-like 339 410 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01995 Rops-Chr10 36381639 36388543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01995 - - gmx:100789173 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01995 10 36381639 36388543 Rops10g01995 10 36381639 36388543 ECH
Rops9g02463 9 45784776 45793039 Rops10g01995 10 36381639 36388543 PCT