Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02071 ATGGCCTCAGAAACACACCCTCCACAAGGTCTAACACCTGAAGAATATGCTGAACTAGAACCCATCATCAAAAAATACCACAACTTTGAGCCTATTCCAAACACATGCACTTCTATTATAACATACAAAATTGATGCCCCAGCAAGCATGGTGTGGCCCTTTGTTAGAAGCTTTGAGAATCCTCAAAAGTACAAGCACTTCATCAAAGGTTGCAACATGAGAGGTGATGGTGGGGTTGGTAGCATAAGAGAGGTAACTGTGGTTTCAGGGTTACCAGCTTCAACAAGCACTGAAAGGCTTGAGATTTTGGATGATGACAAACACGTATTAAGCTTTAGTGTTGTTGGCGGTGAGCACCGACTTCAAAATTATCGTTCAGTGACTTCAGTGAATGAGTTTAACAAAGAAGGTAAGGTTTACACTGTTGTTGTGGAGTCTTATATTGTTGACATACCACAAGGGAACACTGAAGAAGACACAAAGATGTTTGTTGACACTGTGGTGAAGCTCAACCTTCAGAAACTTGGGGTGGTGGCTATGTCTACATCATCCATGCATGGACAACAATGA 570 0.4193 MASETHPPQGLTPEEYAELEPIIKKYHNFEPIPNTCTSIITYKIDAPASMVWPFVRSFENPQKYKHFIKGCNMRGDGGVGSIREVTVVSGLPASTSTERLEILDDDKHVLSFSVVGGEHRLQNYRSVTSVNEFNKEGKVYTVVVESYIVDIPQGNTEEDTKMFVDTVVKLNLQKLGVVAMSTSSMHGQQ* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02071 189 Gene3D - 1 189 IPR023393 -
Rops9g02071 189 CDD PYR_PYL_RCAR_like 43 175 - -
Rops9g02071 189 PANTHER - 35 175 - -
Rops9g02071 189 FunFam Abscisic acid receptor PYR1 1 188 - -
Rops9g02071 189 Pfam Polyketide cyclase / dehydrase and lipid transport 43 175 IPR019587 -
Rops9g02071 189 SUPERFAMILY Bet v1-like 36 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02071 Rops-Chr9 38066479 38067368 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02071 K14496 - gmx:100778183 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01620 4 39484007 39486629 Rops9g02071 9 38066479 38067368 ECH
Rops9g02071 9 38066479 38067368 Rops9g02071 9 38066479 38067368 ECH