Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01620 ATGAACGGTGGTGAACCATATGGTGCTATTAAGACACAGTACATTAGGAGACATCACAGACATGAACCAAAAGAAAATCAGTGCTCTTCTGCACTTGTCAAACACATAAAGGCCCCGGTTCATCTTGTGTGGTCTCTGGTTAGAAGATTTGATCAGCCCCAGAAATATAAACCATTTGTTAGCAGATGTATCATGCAAGGGGACCTTGGCATTGGAAGTGTTAGAGAAGTGAATGTTAAATCTGGCCTTCCAGCTACAACTAGTACTGAGAGGTTGGAACAACTTGATGATGAGGAACACATTCTTGGCATCAGGATTGTTGGAGGTGACCATAGGCTGAGGAACTATTCTTCGATAATCACTGTCCATCCAGAGGTCATTGATGGAAGACCTGGTACAATGGTGATTGAATCATTTGTTGTGGATGTGCCTGATGGGAACACCAGGGATGAAACTTGTTACTTTGTTGAGGCTTTGATCAGGTGCAACCTAAGCTCTTTGGCTGATGTCTCAGAGAGGATGGCTGTGCAGGGTCGAACTGATCCTATTATCAACCATTAA 561 0.4349 MNGGEPYGAIKTQYIRRHHRHEPKENQCSSALVKHIKAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIDGRPGTMVIESFVVDVPDGNTRDETCYFVEALIRCNLSSLADVSERMAVQGRTDPIINH* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01620 186 Gene3D - 6 181 IPR023393 -
Rops4g01620 186 PANTHER - 25 169 - -
Rops4g01620 186 Pfam Polyketide cyclase / dehydrase and lipid transport 32 172 IPR019587 -
Rops4g01620 186 CDD PYR_PYL_RCAR_like 28 172 - -
Rops4g01620 186 SUPERFAMILY Bet v1-like 28 169 - -
Rops4g01620 186 FunFam Abscisic acid receptor PYL9 2 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01620 Rops-Chr4 39484007 39486629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01620 K14496 - gmx:100500065 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01620 4 39484007 39486629 Rops9g02071 9 38066479 38067368 ECH
Rops4g01620 4 39484007 39486629 Rops4g01620 4 39484007 39486629 ECH