Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02061 ATGGAACGTGCTCGTAGGCTTGCAAACCGTGCCATACTGAGGCGTTTGGTTTCAGAGGCAAAGCAGATTCGGCAAAATGAATCTGTGTGGAACAGTTCCCCTGTTCCATTGTACTCTGCTTCAAGGTGTGTGTCCTCTGTTTCTCACTCTGTTTTCAGAAACAGAGGATCCAAATCACACAACTTTCTAGGAAAGAACATGAACAAGTCACATGGTGTTGTTGGATATCTCGGTGCTGGGTGTTCTTCACAGACTAGATCCATCTCAGTTGAGGCTCTTCAACAAAGTGACACTTTCCCAAGACGCCATAACTCTGTTACCCCTGAAGAACAAACCAAGATGGCTCAATCATGTGGCTATGACCACCTTGATTCCCTTGTTGATGCAACTGTTCCTAAATCCATTCGTTTGAATGAAATGAAGTTCGGTAAGTTCGATGCAGGGCTAACAGAAAGCCAAATGATTGAGCACATGCAGTACTTGGCCTCAAAGAACAAGGTTTTCAAGTCATACATTGGTATGGGGTACTATAACACTCATGTTCCACCTGTCATTTTGAGGAACATCATGGAAAACCCTGCTTGGTACACACAGTACACTCCTTACCAAGCTGAGATTTCTCAAGGGCGTCTTGAATCCTTGCTGAATTTCCAAACCATGATTACAGATCTTACTGGTTTGCCTATGTCAAATGCTTCATTGCTTGATGAAGGAACTGCTGCTGCTGAAGCAATGTCTATGTGTAATCATATTCAGAAGGGTAAGAAGAAGACTTTTATCATTGCTAACAACTGTCATCCACAAACCATTGATATATGTGAGACAAGAGCTGCTGGTTTTGATCTTAAGGTTGTGACAGCAGATCTTAAGGATATTGATTACAAATCTGGTGATGTTTGTGGTGTGCTTGTTCAGTATCCTGGTACTGAGGGTGAGATTTTGGATTATGGAGAGTTTATTAAGAAAGCTCATGCTCATGAAGTTAAGGTTGTTATGGCAAGTGATCTTTTGGCATTGACTGTGTTGAAGCCTCCTGGTGAGTTGGGGGCTGATATTGTTGTTGGTTCAGCTCAGAGGTTTGGGGTTCCATTGGGTTATGGAGGTCCTCATGCAGCTTTCTTGGCCACTTCACAAGAGTACAAGAGGATGATGCCAGGGAGAATCATTGGTGTAAGTGTTGATTCTTCAGGAAAGACAGCTTTGAGAATGGCAATGCAAACAAGGGAGCAGCATATCCGTAGGGACAAGGCTACCAGCAACATCTGCACTGCTCAGGCACTGCTTGCAAACATGTCTGCCATGTATGCTGTATATCATGGACCTGAAGGCCTTAAAACCATTGCTCAACGTGTTCATGGTCTTGCTGGGGTACTTGCTTTGGGATTAAAGAAACTTGGAACTGTGGAAGTTCAGGATCTTCCCTTCTTTGACACTGTAAAGGTTAAGACTGCAAATGCTCATGCAATTGCTGATGCTGCTCTCAAAAGTGAAATAAATTTGCGAGTTGTAGATGGAAACACTATCACTGTTGCTTTTGATGAAACAACCACATTAGAGGATGTTGACAAGCTTTTCAAAGTTTTTGCTGGTGGCAAAACTGTCTCTTTCACAGCTGCATCTCTAGCACCAGAAGTTCAGAGTGCAATTCCTTCTGGATTAGTTAGGGAGAGCCCTTATCTGACACACCCTATCTTTAACACGTACCAAACTGAGCATGAGTTGCTCAGATACATTCATAGGCTACAGTCGAAAGATCTCTCACTATGCCACAGTATGATCCCATTGGGGTCTTGTACAATGAAGCTGAATGCAACAACTGAAATGATGCCTGTGACATGGCCCAACTTTACTGATATTCACCCTTTTGCACCAATTGACCAGGCTCAAGGTTATCAGGAAATGTTCAACAATTTGGGTGAACTGTTGTGTACCATCACTGGGTTTGACTCCTTCTCTTTGCAACCAAATGCTGGTGCTGCTGGTGAATATGCTGGACTGATGGTTATTCGTGCATATCATTTGTCAAGAGGAGACCACCACCGCAATGTTTGCATTATACCTGTCTCAGCACATGGTACAAATCCTGCTAGTGCTGCTATGTGTGGAATGAAAATTGTCACCGTTGGAACTGATGCCAAGGGAAACATTAACATTGAAGAGTTGAGGAAGGCTGCTGAAAAACATAAGGACAACCTATCTGCACTTATGGTCACATATCCTTCTACTCATGGTGTTTACGAAGAAGGTATTGATGAGATTTGCAAGATTATTCATGATAATGGAGGTCAAGTATATATGGATGGTGCCAACATGAATGCACAGGTGGGACTTACAAGCCCAGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTCCATAAGACATTTTGCATCCCTCATGGAGGAGGTGGCCCTGGTATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCACACCCTGTGGTTCCCACTGGTGGAATTCCTGCCCCTGACAAATCTCAACCACTTGGTGCCATCTCTGCTGCACCTTGGGGCTCAGCACTCATATTGCCAATCTCTTACACTTACATAGCTATGATGGGTTCTCAAGGACTCACCGATGCATCAAAGATAGCCATTTTGAATGCAAACTACATGGCAAAACGATTGGAGAATCATTACCCCGTTCTTTTCCGTGGAGTCAATGGAACAGTTGCCCATGAATTCATTATTGACTTGAGAAGCTTTAAGCATACTGCTGGGATAGAGCCTGAAGATGTTGCGAAGCGCCTCATGGACTATGGTTTTCATGGACCAACAATGTCGTGGCCTGTGCCTGGCACACTCATGATTGAGCCTACCGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTTCTGTGATGCTCTTATTTCCATTAGAGAAGAAATTGCGGCGATTGAGAAAGGAAAAGCTGACATTAACAACAATGTACTTAAGGGAGCACCTCATCCACCATCACTGCTCATGGGCGATGCATGGACAAAACCATACTCCAGGGATTATGCAGCCTTCCCAGCTCCATGGCTCCGTGGTGCCAAGTTCTGGCCTACCACAGGACGTGTTGATAATGTGTATGGTGACCGCAACCTCATTTGCACCCTTCTTCCAGCTTCACAAGTTGTTGAAGAACAAGCTGCTGCCACAGCTTAG 3180 0.4418 MERARRLANRAILRRLVSEAKQIRQNESVWNSSPVPLYSASRCVSSVSHSVFRNRGSKSHNFLGKNMNKSHGVVGYLGAGCSSQTRSISVEALQQSDTFPRRHNSVTPEEQTKMAQSCGYDHLDSLVDATVPKSIRLNEMKFGKFDAGLTESQMIEHMQYLASKNKVFKSYIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNHIQKGKKKTFIIANNCHPQTIDICETRAAGFDLKVVTADLKDIDYKSGDVCGVLVQYPGTEGEILDYGEFIKKAHAHEVKVVMASDLLALTVLKPPGELGADIVVGSAQRFGVPLGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKTALRMAMQTREQHIRRDKATSNICTAQALLANMSAMYAVYHGPEGLKTIAQRVHGLAGVLALGLKKLGTVEVQDLPFFDTVKVKTANAHAIADAALKSEINLRVVDGNTITVAFDETTTLEDVDKLFKVFAGGKTVSFTAASLAPEVQSAIPSGLVRESPYLTHPIFNTYQTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPNFTDIHPFAPIDQAQGYQEMFNNLGELLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVTVGTDAKGNINIEELRKAAEKHKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPDKSQPLGAISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLENHYPVLFRGVNGTVAHEFIIDLRSFKHTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAAIEKGKADINNNVLKGAPHPPSLLMGDAWTKPYSRDYAAFPAPWLRGAKFWPTTGRVDNVYGDRNLICTLLPASQVVEEQAAATA* 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02061 1059 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 93 1050 IPR003437 GO:0004375|GO:0006544
Rops9g02061 1059 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 82 1050 IPR020581 GO:0004375|GO:0006546
Rops9g02061 1059 Pfam Glycine cleavage system P-protein 102 528 IPR020581 GO:0004375|GO:0006546
Rops9g02061 1059 Pfam Glycine cleavage system P-protein 545 821 IPR020581 GO:0004375|GO:0006546
Rops9g02061 1059 FunFam glycine dehydrogenase (Decarboxylating), mitochondrial 610 849 - -
Rops9g02061 1059 NCBIfam aminomethyl-transferring glycine dehydrogenase 102 1043 IPR003437 GO:0004375|GO:0006544
Rops9g02061 1059 Gene3D Aspartate Aminotransferase, domain 1 863 997 IPR015422 GO:0003824
Rops9g02061 1059 FunFam Glycine cleavage system P protein 435 524 - -
Rops9g02061 1059 SUPERFAMILY PLP-dependent transferases 102 529 IPR015424 -
Rops9g02061 1059 CDD GDC-P 151 528 IPR020581 GO:0004375|GO:0006546
Rops9g02061 1059 Gene3D Aspartate Aminotransferase, domain 1 171 524 IPR015422 GO:0003824
Rops9g02061 1059 SUPERFAMILY PLP-dependent transferases 547 1044 IPR015424 -
Rops9g02061 1059 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 859 997 - -
Rops9g02061 1059 CDD GDC-P 571 966 IPR020581 GO:0004375|GO:0006546
Rops9g02061 1059 Coils Coil 718 738 - -
Rops9g02061 1059 FunFam Glycine dehydrogenase (decarboxylating), mitochondrial 182 442 - -
Rops9g02061 1059 Gene3D - 182 442 IPR015421 GO:0003824
Rops9g02061 1059 Gene3D - 610 862 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02061 Rops-Chr9 37874138 37880939 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02061 K00281 - gmx:100819714 1896.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02061 9 37874138 37880939 Rops10g01227 10 24795050 24800936 PCT