Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02022 ATGTATAGGTACGAGAAGACACCAAGAGAGGACAGGTTCCTAAGCTCTTCTTTCTCTTCCTCACTCCTTGACCAAATTTATCGTTCAATCGATGAGGGTGAGAGAAATAGCAGCGAAACGAAGTTCTACAGAGAAACAGACAGAAAAAAAGAAAACAACAAGGCAAGAAAAGAAAAAGTTGAAGTGAGAGAAATGGACAATAGAAAAACACATAATTGTTATAGTGATCACGAACAAGATGTTCTGTTCTTCAGTTCCACCTCAGTTTCCTCGGATTCTAGTTCCGGAGGACTCTCCTCTTCCGACACAGAGTCCGTATACGGATCAAGGTCACGTGCCTCGTGTTTTGCGCCACAGAAGCCAAAGCCAGTGAGAACAAGCGCGTCTTTCAGATGGGAGAAACAGGGAACAACACGAAACATGTTCGATGGTTTTTGTCGGAATCCCAACAATGCCAAACAGTGTAAAATTCGCGATGAGGAAACGTTGATAAAGTCGAAATCAAGGGCGTTGAAGATTTACAACAACCTCAAAAAGGTGAAGCAACCCATTTCACCTGGTGGAAGGTTAACGAGTTTCCTTAACTCTCTGTTCCAAACAGGGAATGCTAAGAAGAAAAATAGTGGCACGTGTGAGGATGCTAACGCTGAGAGAAAAGCTCAAGCTTACACGTACACCTCTGCTTCTTCATTCTCAAGGTCTTGTTTGAGTAAAACCTCGTCTTCTGATAGAGATTTGTTATACAATGGGGTGAAGAGAACGGTGCGTTTTATGGAGGAGGAGCAGCTCAAGTTCCCGACCATAGTGGATGAAACTTCTAGAGGGTTCTTAAGAGAGTACCAGAAGAAGAAGAAGAACGATTTAGTTTTGAAGGATTTGCCTATAAAGACAAACGTTAACGAAGAAGATGAAGATTATGATGATGATGCAGCAAGTTATGCAAGTTCGGATCTTTTTGAACTTGATCATTTAGCTGTGATTGGAAATGATAGGTATTGTGAGGAACTTCCCGTGTATGAAACTACTCATGTTAGTACTAATCGTGCCATTGCTAATGGCCTCTTAGTGTAG 1071 0.4183 MYRYEKTPREDRFLSSSFSSSLLDQIYRSIDEGERNSSETKFYRETDRKKENNKARKEKVEVREMDNRKTHNCYSDHEQDVLFFSSTSVSSDSSSGGLSSSDTESVYGSRSRASCFAPQKPKPVRTSASFRWEKQGTTRNMFDGFCRNPNNAKQCKIRDEETLIKSKSRALKIYNNLKKVKQPISPGGRLTSFLNSLFQTGNAKKKNSGTCEDANAERKAQAYTYTSASSFSRSCLSKTSSSDRDLLYNGVKRTVRFMEEEQLKFPTIVDETSRGFLREYQKKKKNDLVLKDLPIKTNVNEEDEDYDDDAASYASSDLFELDHLAVIGNDRYCEELPVYETTHVSTNRAIANGLLV* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02022 356 MobiDBLite consensus disorder prediction 29 64 - -
Rops9g02022 356 Coils Coil 48 68 - -
Rops9g02022 356 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 8 355 IPR039621 GO:0009734
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02022 Rops-Chr9 37281566 37283066 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02022 - - lja:Lj5g3v0465910.1 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02022 9 37281566 37283066 Rops9g02022 9 37281566 37283066 ECH
Rops10g01269 10 25246619 25247893 Rops9g02022 9 37281566 37283066 ECH
Rops4g01858 4 43245532 43247206 Rops9g02022 9 37281566 37283066 ECH