Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01269 ATGTACAGGTTGGAGAAGACTCGTAGAGAACATAGGTCGTTGTCTCAAAACGACACAAAAAACCCATCTTTCTCTTCCACTCTTCTCGACAAGATTTACCGTTCCATTGACGAAGGAGAGAAAAAGAGTAGCGACATGAAGTTCTACACACAAACAATGGCGAAGAAACAGAGCAGAATCAATAGAGCCGTGGAGAAAGAAGAGTTTGGAACAGCAAGTGTTGGCAGTGCGTGTTTGCTTGAGAAATGGATGGATAGAAAAGCAAGCGAAAAAATTGGAAGAACTCAAGGGAGACGTTGGACGGCACAAATGGAGAGAAAATCGCATCATGACCATGTTGACCAGGATGTTCTTTTCTTCAGTTCCACTTCAAGTTCTTCAGATTCTAGTTCTGGGTTATTGTCATCCTCTGATACAGAATCCATGTACGGAGCGAGATCAAGAGTTTCATGTTTCGCTCCATCGAGGCCTAAACCTGTGAAAACCACCGTGTCGGAGAAAAACATTGCAAGTGATGAAGAGGGTTTGATCAAGTCAAAATCAAGGGCCTTGAAGATTTACAACAATCTCAAGAAGGTGAAGCAACCAATCTCACCAGGGGGCAAGCTCACAAGTTTTCTCAACTCTCTGTTCACAACAGGGAATCCAAAGAAAAACAAGACCACAACACCCTCTTTTGGAACCACCTACGAAGACTCGAGCGCAGAGAGAAAAGCCAAGTCAGGACAAGCCTCAACTTGTTCTTCGGCATCCTCGTTCTCGCGGTCTTGTTTGAGCAAGACTTCACCTTCCTCAAGAGACAAGTTGCGCAATGGGGTTAAAAGGACAGTGCGTTTCTACCCTGTAAGTGTGATTGTTGATGAAGATAGTCGACCCTGTGGGCATAAATGCTTGTACGAAGAAGAGGACACGAGTCTAATGGCTATGTCTGTGCCAACCGCGTGGAAAATTGGAAAATCACCTACCAAGAAGAACGAGGAAGAGGTCGTGGATAAGAGCAAGCGAGTGGAGGAAGCTGCTAGAGAGTTCTTAAAAGATTACCATCGCAACCAGAAAAAGAGCGATTTTAATTTCAGGGATTTTCCTATAAGGACAAACGAGGATGAAGATGATGATGATGATGAGGACGATGCTGCAAGCTGTTCAAGTTCTGATCTTTTCGAGCTTGATCACCTAGCGGTGATTGGAAATAATAGGTATTGTGAGGAGTTGCCGGTGTATGAGACTACTCATGTCAGGACTAATCGTGCCATTGCTAATGGCCTCATATTGTAA 1275 0.4424 MYRLEKTRREHRSLSQNDTKNPSFSSTLLDKIYRSIDEGEKKSSDMKFYTQTMAKKQSRINRAVEKEEFGTASVGSACLLEKWMDRKASEKIGRTQGRRWTAQMERKSHHDHVDQDVLFFSSTSSSSDSSSGLLSSSDTESMYGARSRVSCFAPSRPKPVKTTVSEKNIASDEEGLIKSKSRALKIYNNLKKVKQPISPGGKLTSFLNSLFTTGNPKKNKTTTPSFGTTYEDSSAERKAKSGQASTCSSASSFSRSCLSKTSPSSRDKLRNGVKRTVRFYPVSVIVDEDSRPCGHKCLYEEEDTSLMAMSVPTAWKIGKSPTKKNEEEVVDKSKRVEEAAREFLKDYHRNQKKSDFNFRDFPIRTNEDEDDDDDEDDAASCSSSDLFELDHLAVIGNNRYCEELPVYETTHVRTNRAIANGLIL* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01269 424 MobiDBLite consensus disorder prediction 239 266 - -
Rops10g01269 424 MobiDBLite consensus disorder prediction 1 16 - -
Rops10g01269 424 MobiDBLite consensus disorder prediction 214 269 - -
Rops10g01269 424 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 424 IPR039621 GO:0009734
Rops10g01269 424 MobiDBLite consensus disorder prediction 214 232 - -
Rops10g01269 424 MobiDBLite consensus disorder prediction 360 380 - -
Rops10g01269 424 MobiDBLite consensus disorder prediction 366 380 - -
Rops10g01269 424 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01269 Rops-Chr10 25246619 25247893 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01269 - - qsu:112008522 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01269 10 25246619 25247893 Rops10g01269 10 25246619 25247893 ECH
Rops10g01269 10 25246619 25247893 Rops4g01858 4 43245532 43247206 ECH
Rops10g01269 10 25246619 25247893 Rops9g02022 9 37281566 37283066 ECH
Rops4g01858 4 43245532 43247206 Rops10g01269 10 25246619 25247893 ECH