Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01969 ATGTTGTTTTGGAGATCTCTATCGTTCTCTTTGATCCTTCTTCTGATTTTCATCCATGGAAGCCTCTGCTTCTACCTCCCTGGCGTCGCACCACAGGATTTCCATAAGGGAGATCTTCTGCAAGTGAAAGTAAACAAATTAACTTCAACGAAGACCCAGCTTCCTTACACATATTATTCACTTCCTTATTGTCCCCCAGAAAACATAGTGGACAGTGCTGAAAATCTCGGAGAAGTGCTTCGTGGTGATCGCATTGAAAATTCTCGTTATGTGTTTAAAATGCGTGAACCACAAATGTGCAATGTTGTGTGTAAGCGTAAACTTGATGCCAAAACTGCCAAAGAGTTCAAAGAGAAGATTGATGATGAGTATCGGGTGAACATGATACTAGATAACCTTCCTTTGGTCGTTCCCATAAAACGTGTGGATCAGGACTCTACTGTTTATCAGCTTGGTTTCCATGTTGGACTCAAAGGGGTATATAGTGGGAGCAAGGAGGAGAAGTATTTCATACACAACCATTTGGCATTTACTGTTAAATATCATAGAGATTCGCTAACTGAATCTGCTAGAATTGTGGGCTTTGAGGTTAAGCCATTCAGTGTTAAACATGAATATGAAGGGAAATGGGATGAAAATACCCGTTTGACAACCTGTGACCCTCATGCTAAACACACTGTTGTCAACTCCAACACTCCTCAAGAGGTTGCAGACAACCAGGAAATTATCTTCACGTATGATGTTGAATTCCAGGAAAGTGACGTGAAGTGGGCTTCAAGATGGGATTCCTATTTGCTGATGAGTGATGACCAAATTCACTGGTTCTCGATTGTGAACTCATTGATGATTGTTCTCTTTCTCTCGGGCATGGTGGCAATGATAATGCTGCGCACACTTTACCGTGATATTTCAAAGTACAATGAGCTTGAGACCCAAGAAGAAGCACAAGAAGAGACTGGTTGGAAGCTTGTCCATGGTGATGTTTTTAGGCCACCGAGCAACTCAGATTTGCTGTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGGATGATACTAGTAACAATGAGCTTTGCTGTCCTGGGGTTCCTTTCTCCTTCAAACCGGGGTGGGCTAATGACAGCCATGCTCTTGCTATGGGTTTTCATGGGGCTTTTTGCTGGTTATGCATCAGCACGCTTATACAAAATGTTCAAAGGATCAGAGTGGAAGAAAATTGCCCTCAGAACTGCAGTCTTGTTCCCTGCAATTGTCTGTGCCATTTTCTTTGTATTAAATGCTCTCATATGGGGACAAAAATCATCTGGAGCTGTGCCATTTGGAACGATGTTTGCTCTGATCTTTTTATGGTTTGGAATCTCTGTTCCACTTGTTTTCGTGGGTGCCTATGTGGGATTCAGGAAGCCTGCAATTGAGAGTCCTGTGAAGACTAACAAAATCCCAAGGCAGATCCCTGAGCAGGCGTGGTACATGAATCCAGTCTTCTCAGTTCTGATTGGGGGAATACTTCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATTCTAACCTCAATCTGGTTGAATCAGTTTTACTACATCTTCGGCTTCCTCTTTTTGGTCTTCGTTATCCTCGTTATCACTTGTGCCGAGATAACCATTGTGCTTTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCCTACCTCACGTCTGGCTCTTCTGCACTGTACCTCTTTCTTTATGCAACATTCTACTTCTTCACCAAGCTTGAAATCACGAAGTTGGTATCTGGGATATTATACTTCGGTTACATGCTTATAGTTTCTTATGCCTTTTTTGTTGTGACTGGTACCATCGGATTTTATGCATGCTTTTGGTTCACAAGGCTCATCTACTCATCAGTCAAAATTGATTAG 1911 0.4233 MLFWRSLSFSLILLLIFIHGSLCFYLPGVAPQDFHKGDLLQVKVNKLTSTKTQLPYTYYSLPYCPPENIVDSAENLGEVLRGDRIENSRYVFKMREPQMCNVVCKRKLDAKTAKEFKEKIDDEYRVNMILDNLPLVVPIKRVDQDSTVYQLGFHVGLKGVYSGSKEEKYFIHNHLAFTVKYHRDSLTESARIVGFEVKPFSVKHEYEGKWDENTRLTTCDPHAKHTVVNSNTPQEVADNQEIIFTYDVEFQESDVKWASRWDSYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPSNSDLLCVYVGTGVQFFGMILVTMSFAVLGFLSPSNRGGLMTAMLLLWVFMGLFAGYASARLYKMFKGSEWKKIALRTAVLFPAIVCAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGAYVGFRKPAIESPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFVILVITCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSGILYFGYMLIVSYAFFVVTGTIGFYACFWFTRLIYSSVKID* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01969 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 23 636 IPR004240 GO:0016020
Rops9g01969 636 SUPERFAMILY MFS general substrate transporter 275 461 IPR036259 -
Rops9g01969 636 Pfam Endomembrane protein 70 55 592 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01969 Rops-Chr9 36398435 36402779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01969 12 636 Miscellaneous Gene Families AT5G10840 85.167 0.0 1094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01969 K17086 - gmx:100810506 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01969 9 36398435 36402779 Rops9g01969 9 36398435 36402779 ECH
Rops9g01969 9 36398435 36402779 Rops10g00171 10 5378063 5381405 PCT