Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01941 ATGCTATGTAAACTGGTGCCTTTGCAGAAGAAGAAAAAACCCGGTTCGGTTCCGGTTTACCTTAATGTTTATGATCTTACACCGATTAATGGGTATGCTTATTGGTTTGGCCTTGGAGTTTACCATTCTGGTGTTCAAGTTCATGGTGTAGAATATGGATTTGGAGCACATGAACGTGACACCACAGGGATTTTTGAAGTGGAACCTGGACACTGTCCAGGATTCACCTTCAGAAAATCAATTTACATTGGATCAACAGATATGGGTCCTAAGGATGTTCGGGTATTTATGGAGAAGCTAGCTGAAGAGTATCCTGGGAACACCTACCACCTTATCCAGAAAAACTGCAACCACTTCTGTAATGATGTTTGTGTCAGATTAACAGGAAAGTCAATCCCTCGATGGGTTAATCGACTTGCTCGACTTGGTTTTCTCTGCAACTGTGTCCTTCCACCAAGCCTAAATGAAACAAAGGTTGGACAAGTTACATTAGAGAGGGCTCAGGAAGGAGAAAAGAAGAAAATGAGAAGCCAGTCCAGCAGGTATGGGGCTTCCTCCTCCAATCCTCCATTGTCTACCAGCCAAAGACATTGTCTTCCTCCATCTTCATCTGTAATTAATTCTTCTTCACCCTCCACCTTAACAGTAAAGTAA 654 0.4266 MLCKLVPLQKKKKPGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGVEYGFGAHERDTTGIFEVEPGHCPGFTFRKSIYIGSTDMGPKDVRVFMEKLAEEYPGNTYHLIQKNCNHFCNDVCVRLTGKSIPRWVNRLARLGFLCNCVLPPSLNETKVGQVTLERAQEGEKKKMRSQSSRYGASSSNPPLSTSQRHCLPPSSSVINSSSPSTLTVK* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01941 217 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Rops9g01941 217 MobiDBLite consensus disorder prediction 166 217 - -
Rops9g01941 217 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
Rops9g01941 217 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Rops9g01941 217 MobiDBLite consensus disorder prediction 179 217 - -
Rops9g01941 217 Gene3D PPPDE domains 12 173 IPR042266 -
Rops9g01941 217 PANTHER DESUMOYLATING ISOPEPTIDASE 16 188 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01941 Rops-Chr9 35657752 35661323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01941 K22763 - gmx:100810627 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01941 9 35657752 35661323 Rops10g01362 10 26420774 26424125 PCT