Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01362 ATGTCCAGCACGCTTCCTGAATCCTCGCTCATGGCGCATGCGCCTTTGCCTTGTCCATTGGGGAAATCGAAGTTAGAAAACCTGAACATTACTGAACCGCTGTCCCCTTCTTATTCTGCAACCCATTTTGAAACACCAAGGGGATCTCTGTTCCCTATGAATTCGTTAATACGGCCTCGGAAGAAGAAATCTGGAACAGTTCCCGTTTACCTTAACGTCTATGATCTCACCACGATTAATGGTTATGCCTATTGGTTTGGCCTTGGAGTTTACCATTCAGGGGTTCAAGTTCATGGTATTGAGTATGGTTTTGGAGCGCATGAACATGACACAACGGGGATTTTTGAAGTGCAACCGAAATACTGTCCTGGTTTCACTTTTAGAAAATCGATTTTCATTGGAACAACAGATCTGGGACCTAAAGATGTTCGGGAATTCATGGAGAAACTAGCTCAACAGTACTCAGGGAACACCTATCATCTCATCTCCAAAAATTGCAACCATTTCTGTAATGATGTTTGTCTCAAATTAACGGGAAAGTCAATCCCTAGATGGGTGAATCGACTTGCTCGACTTGGTCTTCTCTGCAACTGTGTTCTTCCCCCTGGCTTAAATGAGACAAAGGTTCGGCAAGTTACATCAGACAGGGTTCAGAAAGGAGAAAAGAGGAAAATGAGAAGTCAGTCCAGCAGGGTAGTGTGCATTTACTGA 711 0.4388 MSSTLPESSLMAHAPLPCPLGKSKLENLNITEPLSPSYSATHFETPRGSLFPMNSLIRPRKKKSGTVPVYLNVYDLTTINGYAYWFGLGVYHSGVQVHGIEYGFGAHEHDTTGIFEVQPKYCPGFTFRKSIFIGTTDLGPKDVREFMEKLAQQYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNETKVRQVTSDRVQKGEKRKMRSQSSRVVCIY* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01362 236 ProSiteProfiles PPPDE domain profile. 67 204 IPR008580 GO:0008233
Rops10g01362 236 Gene3D PPPDE domains 62 223 IPR042266 -
Rops10g01362 236 SMART DUF862_2a 67 205 IPR008580 GO:0008233
Rops10g01362 236 Pfam PPPDE putative peptidase domain 68 200 IPR008580 GO:0008233
Rops10g01362 236 PANTHER DESUMOYLATING ISOPEPTIDASE 66 227 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01362 Rops-Chr10 26420774 26424125 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01362 K22763 - gmx:100306675 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01941 9 35657752 35661323 Rops10g01362 10 26420774 26424125 PCT