Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01923 ATGAGGACAGAAAAAGGATTGGCAAGAGCTCGATTAGCTATACAAGAAGCTGCTCTTAAGCGAAGCTATGGTTCATTTCAAGAGGGTGACTTTCTCCCCATGGGATCTGTCTACAAAAACCCTTATGCCTTTCATCAGAGTCACAAGGAGATGGAGAAACGTTTCCGAATATGGGTTTACGAGGAAGGAGAGCCACCCCTTTTTCATGACGGGGGAATGAATGACATATACTCGATTGATGGTCAATTCTTGGATGAATTAGAAAGTGGGAAGAGTCTATTTTTAGCTAAAGACCCCAACGAGGCCATTGCTTTCTTCCTTCCAGTTAGTGTGGTTAATATTATACAATATTTGTATCGGCCAGTAACCAATTACTCCCGGGAACCCCTTCAGCATGTCGTCAAGGATTACGTAAATTTGGTATCTCGCAAATATACATACTGGAATAGGAGCAGAGGAGCTGACCATTTTATGCTGTCTTGCCATGACTGGGCACCAGATGTTTCAGCTGCAGATCCTAACCTTTACAAGAACTTCATCAGGGTTCTATGCAATGCAAATACCTCAGAAGGTTTCCAACCAGTGAGGGATGTTTCCTTGCCCGAAATAAAGGTTCCCTATGGAGGATATGGTCCCCCTTGCCTAAACAACACCACTAACAACCGTACTATTTTGGCATTCTTCGCTGGTGGTGCACATGGAAGTGTGAGAGAAGAACTTTTTAGGCATTGGAAGGACAAAGACAACGAGATCCAAGTTTATGAGTATATGCCTGAAACCTTAAACTACTTTTCATTAATGGGCCAAAGCAAGTTTTGCTTATGCCCCAGTGGATATGAAGTGGCAAGCCCAAGAATTGTGGAGTCTGTGCATGCAGGTTGTGTCCCTGTGATCATATCTGAAGATTATGTGTTGCCATTTAGTGATGTTCTTGATTGGACTCAATTTTCAGTTCAAATTCCTGTTTCAAAGATACCCAGCATGAAAAAAATTCTGAAAGGAATTTCTATGGAGGAGTATTTGGTAAAGCAAAGAAATGTGATTCAGGTGCAAAGACATTTTATGCTCCATCGACCTGCTCAACCTTATGATCTTTTGTATATGGTGATGCACTCTGTGTGGCTTAGGAGGCTTAATATAAGGCTTCCACTTTTATGA 1158 0.4188 MRTEKGLARARLAIQEAALKRSYGSFQEGDFLPMGSVYKNPYAFHQSHKEMEKRFRIWVYEEGEPPLFHDGGMNDIYSIDGQFLDELESGKSLFLAKDPNEAIAFFLPVSVVNIIQYLYRPVTNYSREPLQHVVKDYVNLVSRKYTYWNRSRGADHFMLSCHDWAPDVSAADPNLYKNFIRVLCNANTSEGFQPVRDVSLPEIKVPYGGYGPPCLNNTTNNRTILAFFAGGAHGSVREELFRHWKDKDNEIQVYEYMPETLNYFSLMGQSKFCLCPSGYEVASPRIVESVHAGCVPVIISEDYVLPFSDVLDWTQFSVQIPVSKIPSMKKILKGISMEEYLVKQRNVIQVQRHFMLHRPAQPYDLLYMVMHSVWLRRLNIRLPLL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01923 385 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 48 373 IPR004263 GO:0006486|GO:0016757
Rops9g01923 385 Pfam Exostosin family 52 333 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01923 Rops-Chr9 35241219 35245422 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01923 K18789 - twl:119996134 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01923 9 35241219 35245422 Rops9g01923 9 35241219 35245422 ECH
Rops9g01923 9 35241219 35245422 Rops10g00224 10 6839120 6843525 PCT