Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00224 ATGTGGCACTTCAACAAAATACACTTTACTCTGGTTGTGATTGCTATCAATACCTTTGCGGTGTTCTTTGGTATTGATTCATCGGAGAGTGTAAAATGGGTGTCTAGATTGCATGTCTCAACACATTTCCCATCAATTTATAAAAGGCTTCAAAAGGGGCATCCAGAATTGACTCTTCCATCATACAGGGGTGGAGGAAGACACAAGTCAATGGCTTATAATGGAGAACTGAGTTTTATTAATAAATTGCCTATAAAAGGATCAATGCAGGGAGATAGAAAATTGGAGAAGGTTGAAGCAAGTCTTGGAAAAGCAAGAGCCTTGATAAAAGAAGCCTTATTGAGAACCAATGACACAGTGAATGCTAAAGATGCTGATTATGTTCCACAAGGAGACATCTACAGAAACGCCTTCGCTTTCCAAAGGAGTTACCACTTAATGGAGAAGCTCTTCAAAATCTACGTGTATGAAGAGGGAGAGCCCCCTCTATTTCATGATGGTCCCTGCAAGAACATATATTCAATGGAAGGAATCTTTATCAATTTATTGGAAAGCAATACCCTGTTTCGGACTCAGAATCCAGATGAAGCCTATGTCTACTTTCTTCCCTTTAGTGTTGTGATGATTCTTGAGCACCTCTTTCACCCAGTTATTCGTGACAAAGGTGTATTGGGGAGAACCATTGGTGATTATGTCCAAATCATATCCCACAAATATCCCTATTGGAATAGAAGTCATGGAGCTGATCATTTCATGCTTTCTTGTCATGATTGGGGACCAAGAGCAACATGGGACGTTAAAGAATTATATTTCATTGCAATTAGGGTCCTATGCAATTCAAATATCACTGAGAATTTCAATCCCAAGAAGGATGCATCATTACCTGAAATCAACTTGGATACAGGGGAGACAACAGGTCAAGTTGGTGGCTATCCACCATGGAACCGAACAATTTTGGCTTTCTTTGCAGGGCATATGCATGGTAGAATTAGACCATTGCTTTTCAAGTATTGGGAGAACAAAGACAAAGATATGTTAGTTTATGAGGAACTCCCTGAAGGAGTTTATGAGGAACTCCCTGAAGGAGTTTCATACCATGAGACAATGAAGATGAGCAAATACTGCATTTGTCCAAGTGGTTATGAAGTTGCAAGTCCAAGAATTGTTGAGGCAATTTATGCACTATGTGTACCTGTCATATTATCACAACAATATGTGCTTCCTTTTAGTGATATTCTTAACTGGGATTCTTTCTCAGTTCAGATTTCAGTGAGCGACATTCCCAAGCTTAAGGAAATTTTGTTGGGTATTTCTGTCGACAAATATATGAAACTTCAAGAGGGAGTTAAGCAAGTGCAAAGACATTTTGTGGTGAACAATCCTCCTAAGAGATATGATGTATTCCATATGATTCTTCATTCCATATGGCTTAGGAGGTTGAACGTGCATGTGAAATAA 1458 0.3896 MWHFNKIHFTLVVIAINTFAVFFGIDSSESVKWVSRLHVSTHFPSIYKRLQKGHPELTLPSYRGGGRHKSMAYNGELSFINKLPIKGSMQGDRKLEKVEASLGKARALIKEALLRTNDTVNAKDADYVPQGDIYRNAFAFQRSYHLMEKLFKIYVYEEGEPPLFHDGPCKNIYSMEGIFINLLESNTLFRTQNPDEAYVYFLPFSVVMILEHLFHPVIRDKGVLGRTIGDYVQIISHKYPYWNRSHGADHFMLSCHDWGPRATWDVKELYFIAIRVLCNSNITENFNPKKDASLPEINLDTGETTGQVGGYPPWNRTILAFFAGHMHGRIRPLLFKYWENKDKDMLVYEELPEGVYEELPEGVSYHETMKMSKYCICPSGYEVASPRIVEAIYALCVPVILSQQYVLPFSDILNWDSFSVQISVSDIPKLKEILLGISVDKYMKLQEGVKQVQRHFVVNNPPKRYDVFHMILHSIWLRRLNVHVK* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00224 485 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 126 475 IPR004263 GO:0006486|GO:0016757
Rops10g00224 485 Pfam Exostosin family 148 434 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00224 Rops-Chr10 6839120 6843525 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00224 - - gmx:100787227 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00224 10 6839120 6843525 Rops10g00224 10 6839120 6843525 ECH
Rops9g01923 9 35241219 35245422 Rops10g00224 10 6839120 6843525 PCT