Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01912 ATGGCCGATACAAGGTTAATAGTAGTGGCGAATGAAAAGAGTAGTCCTCCTCGACGATCCCCAACGACGCCGTTTTCAACGCTTGCCATCATCGATGGCATTTTTTCAAAGAAGACTAGTTTCTTCTATGACAGGCTTCCTTCTCAACCCCTCAGACTCACCGTCCTCAAATTGGACGGCTCTTCCTTCGAGATTCAAGTTTCAAAGACGGCAACTATTGCAGAGCTTAAGGATGCAGTGGAGGGGGTCTTCAGTTACATGCCTCAGAATGGGCCTGCAAAAATTTCATGGCCGCATGTTTGGGGACAGTTTTGCTTATGCTATGATGGACAGAAGCTAGTTACTGAGGAGGATTATATTAAAAATTATGGCATTAAGGATGGGGACCAGCTTCGTTTTATCCGCCACGTCTCAAACAATTGTGGTGTTCGAAGAAAGCGGTTGAAGAAAGGAGTTGTCCATTTGAAACTACCCAGGAGGTGCAGGTCATCGCAAGTGAATAGCTGTGAACCCAAAGAAAATTGTGATGATGATGAAATTGGTTCTGATGATGATGAAGCCAAAGAGAACGCAGAGATCAAGCATCACATTGAAGAAAAAGAACATGTTGGAAAGAACAAGTTAACTGGTTTTGTGGGAGAGTTGTTCTCATATACCCCACTGGCAGTAATGAGAAAAACTACAACTAAAAGCAGGATTTTCTCATCTATGATTCCCAGATGTTTACTGGGCAGTTTTAGAAAGATTAGAAGGATTGTATGCTTTGGCGGGAGGCGGAACAATTCGTTGAGACTTACATGGAGACAGCATTAA 813 0.4317 MADTRLIVVANEKSSPPRRSPTTPFSTLAIIDGIFSKKTSFFYDRLPSQPLRLTVLKLDGSSFEIQVSKTATIAELKDAVEGVFSYMPQNGPAKISWPHVWGQFCLCYDGQKLVTEEDYIKNYGIKDGDQLRFIRHVSNNCGVRRKRLKKGVVHLKLPRRCRSSQVNSCEPKENCDDDEIGSDDDEAKENAEIKHHIEEKEHVGKNKLTGFVGELFSYTPLAVMRKTTTKSRIFSSMIPRCLLGSFRKIRRIVCFGGRRNNSLRLTWRQH* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01912 270 CDD Ubl_SNRNP25 51 136 IPR040610 -
Rops9g01912 270 Gene3D - 46 144 - -
Rops9g01912 270 Pfam Ubiquitin-like domain 51 137 IPR040610 -
Rops9g01912 270 SUPERFAMILY Ubiquitin-like 46 143 IPR029071 -
Rops9g01912 270 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 14 253 IPR039690 GO:0000398|GO:0005689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01912 Rops-Chr9 34882769 34887598 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01912 - - gmx:100820296 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01912 9 34882769 34887598 Rops9g01912 9 34882769 34887598 ECH
Rops10g01394 10 26916234 26917295 Rops9g01912 9 34882769 34887598 ECH
Rops9g01912 9 34882769 34887598 Rops10g01394 10 26916234 26917295 PCT