Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01394 ATGATGGCCAACATGATTATGGCTTCGTCGTCCTCCAAGACTATGATTCCAATTCCCACTACTAATTCTTCCCTTTCCCCGAAACCCAGACTTCCCAGTCTCCAAATTTCACTCCCCAGAGTTCCAACCCTGAAACTGAAACTGCCAATCACGAAGCTTTCCCTGCTGGGGATAGCCGCAAGCTCAGTGGCCATGGCCCCACCCTCCCTCGCAGCAGAAATTGAGAAAGCAGCTCTGTTTGATTTCAACCTGACACTCCCCATCATAATGGTGGAGTTTCTGCTACTTATGGTTGCTTTGGACAAGATATACTTCACCCCACTTGGGAAATTCATGGACGAAAGGGACGCGGCCATCAGAGAGAAGCTGAACAGCGTGAAGGACACATCGGGTGAGGTGAAGCAGTTGGAGGAGCAGGCGAATGCGGTGCTGAAGGCTGCTCGTGCTGAGATATCTGCGGCTCTGAATCAGATGAAGAAGGAGACACAAGTAGAGGTGGAACAGAAGATTGCAGAGGGTAGGAAGAAAGTGGAGGCAGAGTTGCAGGAGGCTCTGGCCAGCTTGGAGAAGCAAAAGGAAGACACCATTAAGTCCCTGGATTCCCAGATTGCCGCTCTTAGCCAAGACATTGTTAAAAAGGTTCTCCCTACTGCTTAA 657 0.5023 MMANMIMASSSSKTMIPIPTTNSSLSPKPRLPSLQISLPRVPTLKLKLPITKLSLLGIAASSVAMAPPSLAAEIEKAALFDFNLTLPIIMVEFLLLMVALDKIYFTPLGKFMDERDAAIREKLNSVKDTSGEVKQLEEQANAVLKAARAEISAALNQMKKETQVEVEQKIAEGRKKVEAELQEALASLEKQKEDTIKSLDSQIAALSQDIVKKVLPTA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01394 218 Coils Coil 174 209 - -
Rops10g01394 218 PANTHER ATP SYNTHASE SUBUNIT B', CHLOROPLASTIC 68 217 - -
Rops10g01394 218 Pfam ATP synthase B/B' CF(0) 86 215 IPR002146 GO:0015078|GO:0015986|GO:0045263
Rops10g01394 218 CDD ATP-synt_Fo_b 85 215 - -
Rops10g01394 218 Hamap ATP synthase subunit b [atpF]. 80 217 IPR002146 GO:0015078|GO:0015986|GO:0045263
Rops10g01394 218 Coils Coil 119 164 - -
Rops10g01394 218 Hamap ATP synthase subunit b' [atpF2]. 79 216 IPR034679 GO:0015078|GO:0015986|GO:0045263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01394 K02109 - gmx:100527009 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01394 10 26916234 26917295 Rops10g01394 10 26916234 26917295 ECH
Rops10g01394 10 26916234 26917295 Rops9g01912 9 34882769 34887598 ECH
Rops9g01912 9 34882769 34887598 Rops10g01394 10 26916234 26917295 PCT