Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01907 ATGCCCATGTCTAAAGTCTTCGGCTTTTCAGGAGTTGATGATTTTTGTCCTGGGGGGTCAATATATGCGAACCCTAAGGAAGCAAGTTTCTTCCTGCCTCTTGGCCATCAAGTTGATGTTTACTTTCCTCCTCGCAAGAGATCGCGAGTCAGCGCTCCATTTGTTTTTGGTGGAGAATGGTTTGAGCAGAAGCAGAAGACCTCTATTGAAGCTTTGCCAGATGAGTGCCTCTTTGAGATCTTTAGAAGGTTGCCTGTAGGTGAAGCTAGGAGTGCATGTGCTTGTGTTTCCAAGCGCTGGCTTACGCTTCTAAGCAATATTTGTAAGGATGAAATCTGCAGCAACAAAAATACCAGCCTAGAGAGCAAGAATGAAAACGAGGGTGATGATGAAGAATTTGGAGGTGAGGGATACCTCTCTCGAAGCTTGGAAGGAAAGAAGGCAACAGATGTTAGACTTGCTGCCATTGCTGTTGGGACTGCATCTCGAGGAGGACTGGGAAAGCTTTCGATCCGTGGAAGCAACTCAGATCGTGGGGTGACTGCTTTAGGTCTCAAAGCGGTTGCTCGTGGATGCCCTTCTTTAAAGGGTCTTTCTCTATGGAATGTTGCTACCGTTGGTGATGAAGGCCTAATGGAGATTGCCAATGGATGTCAACAGCTACAGAAACTTGATCTTTGCAAGTGCCCCAAAATTTCTGACAAGGCTTTAACTGCAGTTGCAAAGAACTGCCCAAATCTAACCGAGTTATCATTGGAATCATGTCCTAACATTGGTAATGAAGGTCTACAAGCCATTGGGAAATACTGCACCAATCTTAGGTCTATCTCTATCAAGGACTGCGCTGGTGTTGGTGATCAGGGAATTGCTGGTCTGTTTTCTTCAACTTCTTTGGTTCTGTCAAAGGTGAAGCTCCAGGCTCTGACTGTTTCCGATCTCTCTGTAGCTGTCATTGGTCATTATGGCAAGGCAGTCACCGATCTTGTCCTTAATTGCCTTCCAAATGTCAGTGAGAGGGGGTTCTGGGTCATGGGTAATGGCAACGGATTGCACAAACTAAAGTCGCTGACAATTGCATCCTGCAGAGGAGTAACAGATATTGGGCTTGTCGCTGTTGGAAAGGGTTGTCCAAATCTGAAAAGTGTACACCTTCACAAGTGTGCATTTCTGTCAGACAATGGGTTGATTTCATTCACCAAGGCTGCTTCATCACTTGAGAGCCTACAATTGGAAGAGTGCCACAGAATTACCCAAGTTGGGTTTTTTGGTGTCCTTTTTAACTGTGGTGCAAAATTGAAGGCTATTTCTCTGGTGAGCTGCTATGGGATCAAAGATCTTAACTTGGTATTGCCGTCGGTATCTCCTTGTGAAACTCTTCGATCATTATCAATCTGTAACTGCCCTGGATTTGGCAATGCTACCCTTTCCGTACTGGGTAAGCTGTGCCCTCAGCTTCAGCACCTTGAATTGAGCGAACTCAAGGGAGTGACGGATGCTGGGTTGCTTCCACTGCTTGAGAGTTCTGAGGTTGGTCTGGTTAAAGTTAATCTTAGTGGTTGTGTAAATCTTACAGACAAAGTTGTTTCATCCTTGGCTAATCTGCATGGTTGGACTCTTGAGGTTCTGAACCTTGATGGTTGTAAAAATATCAGTGATGCTAGCTTGCTAGCAATTGCTGAACATTGCCAATTGCTTTGTGATCTTGATGTTTCCAAGTGTTCCATCACTGATGCTGGGATTTCAACCCTGGCACATGCAAAACAGTTGAATCTGCAGATTCTTTCTCTCTCAGGTTGCACTTTGGTTACAGACAGAAGCTTGCCCTCTTTGAGTAAATTGGGCCACACCCTTTTGGGACTAAGTATCCAACATTGCAATGCAATCAGCAGCAGCACGGTTGACATGCTTGTGGAACTTCTATGGAGGTGTGACATTCTCTCATAA 1944 0.4511 MPMSKVFGFSGVDDFCPGGSIYANPKEASFFLPLGHQVDVYFPPRKRSRVSAPFVFGGEWFEQKQKTSIEALPDECLFEIFRRLPVGEARSACACVSKRWLTLLSNICKDEICSNKNTSLESKNENEGDDEEFGGEGYLSRSLEGKKATDVRLAAIAVGTASRGGLGKLSIRGSNSDRGVTALGLKAVARGCPSLKGLSLWNVATVGDEGLMEIANGCQQLQKLDLCKCPKISDKALTAVAKNCPNLTELSLESCPNIGNEGLQAIGKYCTNLRSISIKDCAGVGDQGIAGLFSSTSLVLSKVKLQALTVSDLSVAVIGHYGKAVTDLVLNCLPNVSERGFWVMGNGNGLHKLKSLTIASCRGVTDIGLVAVGKGCPNLKSVHLHKCAFLSDNGLISFTKAASSLESLQLEECHRITQVGFFGVLFNCGAKLKAISLVSCYGIKDLNLVLPSVSPCETLRSLSICNCPGFGNATLSVLGKLCPQLQHLELSELKGVTDAGLLPLLESSEVGLVKVNLSGCVNLTDKVVSSLANLHGWTLEVLNLDGCKNISDASLLAIAEHCQLLCDLDVSKCSITDAGISTLAHAKQLNLQILSLSGCTLVTDRSLPSLSKLGHTLLGLSIQHCNAISSSTVDMLVELLWRCDILS* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01907 647 Pfam Leucine Rich repeat 538 559 IPR001611 GO:0005515
Rops9g01907 647 Pfam Leucine Rich repeat 562 584 IPR001611 GO:0005515
Rops9g01907 647 Pfam Leucine Rich repeat 243 266 IPR001611 GO:0005515
Rops9g01907 647 Pfam Leucine Rich repeat 269 292 IPR001611 GO:0005515
Rops9g01907 647 Gene3D Ribonuclease Inhibitor 242 447 IPR032675 -
Rops9g01907 647 PANTHER UNCHARACTERIZED 351 532 - -
Rops9g01907 647 SMART LRR_CC_2 536 561 IPR006553 -
Rops9g01907 647 SMART LRR_CC_2 244 269 IPR006553 -
Rops9g01907 647 SMART LRR_CC_2 270 295 IPR006553 -
Rops9g01907 647 SMART LRR_CC_2 482 507 IPR006553 -
Rops9g01907 647 SMART LRR_CC_2 376 401 IPR006553 -
Rops9g01907 647 SMART LRR_CC_2 509 534 IPR006553 -
Rops9g01907 647 SMART LRR_CC_2 562 586 IPR006553 -
Rops9g01907 647 SMART LRR_CC_2 192 217 IPR006553 -
Rops9g01907 647 SMART LRR_CC_2 588 613 IPR006553 -
Rops9g01907 647 SMART LRR_CC_2 456 481 IPR006553 -
Rops9g01907 647 SMART LRR_CC_2 218 243 IPR006553 -
Rops9g01907 647 SMART LRR_CC_2 402 427 IPR006553 -
Rops9g01907 647 SMART LRR_CC_2 350 375 IPR006553 -
Rops9g01907 647 SMART fbox_2 72 113 IPR001810 GO:0005515
Rops9g01907 647 Pfam F-box domain 72 108 IPR001810 GO:0005515
Rops9g01907 647 SUPERFAMILY RNI-like 313 643 - -
Rops9g01907 647 SUPERFAMILY RNI-like 185 298 - -
Rops9g01907 647 FunFam EIN3-binding F-box protein 1 62 111 - -
Rops9g01907 647 SUPERFAMILY F-box domain 65 106 IPR036047 GO:0005515
Rops9g01907 647 CDD F-box_AtTIR1-like 69 103 - -
Rops9g01907 647 FunFam EIN3-binding F-box protein 1 508 645 - -
Rops9g01907 647 FunFam EIN3-binding F-box protein 1 257 447 - -
Rops9g01907 647 Gene3D Ribonuclease Inhibitor 138 241 IPR032675 -
Rops9g01907 647 FunFam EIN3-binding F-box protein 1 138 256 - -
Rops9g01907 647 Gene3D Ribonuclease Inhibitor 509 569 IPR032675 -
Rops9g01907 647 Gene3D Ribonuclease Inhibitor 448 508 IPR032675 -
Rops9g01907 647 Gene3D Ribonuclease Inhibitor 570 645 IPR032675 -
Rops9g01907 647 Gene3D - 62 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01907 Rops-Chr9 34732549 34736237 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01907 K14515 - gmx:100820247 1121.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01907 9 34732549 34736237 Rops9g01907 9 34732549 34736237 ECH
Rops9g01907 9 34732549 34736237 Rops10g01406 10 27072376 27075904 PCT