Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01856 ATGCTGAAGCAATTCCTCAACAAGCTTCCTCGGAAATCATCGAAAACCGACTCGGACGAGTCCACTCGGGGTGACTCGTCGCGTTCCAGTGAGCCGCCACGCGCCGCCGGTAAAGGCCACCGACAGCACGGTGGCGGTTCTTCCTCCCGAGCCAATGCCGCGAAACGAGCTTCCTCGTCGGCGGTGTTTCCGGCGAGCATGGTGTCTGGGATTGAACCTTTGGTGCCGTTTAAGGATGTTCCAAATGCTGAGAAGATGAACTTGTTTGTGAGCAAGTTGAGCCTTTGTTGTGTCACTTTTGATTTCACTGACCCTGGTAAGAACATAGCTGATAAAGATGTGAAAAGGAGAACTTTGATTGAACTTGTTGATTTTGTGGCTTGTGGTTCAATGAGATTTAGTGAGCCTGCTATTCTTGCTATGTGTAGAATGTGTGCTATTAATCTGTTTAGAGTTTTCCCACCTAATTATAGGGCTAATGGGATTATTGGTGGTGGTGGTGGTGGTGAGAATGATGATGATGAGCCAATGTTTGATCCTTCTTGGCCACATTTGCAAATTGTGTATGAATTGCTGCTTAAGTTTATCTCTTCTTCTTGCCTCGATGCTAAGGTAGCGAAGAAGTATATCGATCATTCATTTATTTCCAGATTGCTAGAATTGTTTGATTCAGAAGATCCTAGAGAAAGAGACTGCTTGAAGACGATTCTGCATAGGATTTATGGGAAGTTCATGGTGCACAGACCATTTATTCGAAAATCCATTAACAATATATTTTATCGATTTGTGTTTGAGACTGAGAAACACAATGGAATAGCTGAGTTGTTGGATATTTTTGGGAGTGTGATCAGCGGGTTTGCTTTACCGTTGAAAGAGGAACACAAAATCTTCTTGTGGAGAGTTTTGATCCCCTTGCACAAGCCTAAATCTATGGGGGTCTACTTTCAGCAATTGACCTATTGTGTTACGCAGTTTATAGAGAAGGAGCCGAAGTTATCAAGCATTGTGATTAGGGGTTTGTTAAAATATTGGCCAGTAACAAATAGTCAGAAAGAGGTGATGTTTCTGTGTGAAATGGAAGAAATTTTGGAAGGAATTAACATGGTAGAGTTCCAGAGGGTCATGGTCCCATTGTTTTGGAGGATTGGGTGCTGCATTAACAGCTTACACTTTCAGGTAGCTGAAAGGGCCCTTTTCTTATGGAACAATGATCACATTGTCAACTTGATTGCTCATAACCGTCAAGTGATCCTGCCCATCATATTTCCAGCTTTAGATGGGAATATTCAAAACCACTGGAACCCAGCAGTTGTCAACTTAACTCATAACATTAGAAAGATGTTCTTGGAGATGGATGAGAAGCTCTTCATTTCTTGTCATTCTCACTTTAAAGAGGAAGAAGCAATTTTAAGCTCAGAGGCTGAGAAGCGAAAAGAGGCATGGAAACAACTAGAGCATGCAGCTAGTCTCAAGCCTGTAATTGGAAATACTGCTGTGTTAGTGTCTCCTTTGATGACATGA 1521 0.4247 MLKQFLNKLPRKSSKTDSDESTRGDSSRSSEPPRAAGKGHRQHGGGSSSRANAAKRASSSAVFPASMVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFTDPGKNIADKDVKRRTLIELVDFVACGSMRFSEPAILAMCRMCAINLFRVFPPNYRANGIIGGGGGGENDDDEPMFDPSWPHLQIVYELLLKFISSSCLDAKVAKKYIDHSFISRLLELFDSEDPRERDCLKTILHRIYGKFMVHRPFIRKSINNIFYRFVFETEKHNGIAELLDIFGSVISGFALPLKEEHKIFLWRVLIPLHKPKSMGVYFQQLTYCVTQFIEKEPKLSSIVIRGLLKYWPVTNSQKEVMFLCEMEEILEGINMVEFQRVMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALDGNIQNHWNPAVVNLTHNIRKMFLEMDEKLFISCHSHFKEEEAILSSEAEKRKEAWKQLEHAASLKPVIGNTAVLVSPLMT* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01856 506 MobiDBLite consensus disorder prediction 1 53 - -
Rops9g01856 506 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 488 IPR002554 GO:0000159|GO:0007165|GO:0019888
Rops9g01856 506 MobiDBLite consensus disorder prediction 10 27 - -
Rops9g01856 506 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 81 487 - -
Rops9g01856 506 PIRSF PP2A_B56 3 502 IPR002554 GO:0000159|GO:0007165|GO:0019888
Rops9g01856 506 Gene3D - 81 487 IPR011989 -
Rops9g01856 506 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 489 IPR002554 GO:0000159|GO:0007165|GO:0019888
Rops9g01856 506 SUPERFAMILY ARM repeat 87 484 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01856 Rops-Chr9 33531543 33535339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01856 K11584 - gmx:100781390 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01856 9 33531543 33535339 Rops10g01450 10 27742185 27745367 PCT