Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01450 ATGCTCAAGCAATTCCTCAGTAAACTTCCTCGTAAGACATCGAAACCCGACCCGAACGAGTCATGCCGAGACGACTCGTCGCGTTCAAGCTCCTCCCGGGAGGCTTCTCCACGCGCCGCTGGTAAAAACAACCGGTCACATGGCGGCGGCAGCTCCGCCTTGAAAAGGACTTCCTCGTCGGCGGTTTTTCCGGCGAGCACCGTGTCGGTGATTGAACCTTTGGTGCCGTTCAAGGATGTTCCCAACTCGGAAAAGATGAACCTTTTTGTGAGCAAGTTGAGCCTTTGTTGTGTCACGTTTGATTTCACCGACCCTGGTAAGGACACGGTGGAGAAAGATGTAAAAAGACGAACTTTGGTTGAACTCGTTGATTTTGTGTCTTCTTATGGGTCAAGGTTTGGTGAACCTGCTATTCTTGCTATGTGTAGAATGTGTGCTATTAATCTCTTTCGGGTTTTCCCGCCAAATTATAGGTCTAATCGAGGTGGTGAGAATGATGATGATGAACCAGCTTTTGATCCTGCTTGGCCACATTTGCAGCTTGTGTATGAATTGCTGCTTAAATTTATCACATCTTCATGCCTTGATGCAAAGGTGGCTAAGAAGTATATCGACCATTCATTTATTTCAAGGTTGTTGGAGTTGTTTGATTCAGAGGATCCTAGGGAAAGAGATTGCTTGAAGACAATTCTGCATAGAGTTTATGGGAAGTTCATGGTGCATAGACCCTATGTTCGAAAATCTATTAACAATGTGTTTTATAGGTTTGTTTTTGAGACTGAGAAACACAATGGGATTGCTGAGTTGTTGGAGATTTGCGGGAGCGTAATTAGCGGGTTTGCTTTGCCTTTGAAAGAGGAACATAAAATCTTCTTGTGGAGAGTTTTGATCCCCTTGCACAAGCCAAAATCTATGGGGGTCTACTTCCAGCAATTGTCCTACTGTGTTACACAGTTTATAGAGAAGGAGCCCAAGTTAGCGAGCATTGTGATAAGGGGTTTGTTGAAATATTGGCCAATAACACACAGTCAGAAAGAGGTAATGTTCCTGGGTGAACTGGAAGAAATTTTGGAAACAATTAACATGGTAGAATTCCAGAGGGTCATGGTCCCGTTGTTTTGGAGAATTGGATGCTGCATTAACAGTTTACACTTTCAGGTGGCTGAAAGGACCCTTTTCTTATGGAACAACGATCATATTGTGAACTTGATTGCTCACAACCGTCAGGTGATCCTGCCCATCATATTTCCAGCATTAGAAAAGAATTCTCAAAATCACTGGAACCAAGCAGTGCTGAACTTAACTCACAATATTAGAAAGATGTTCATGGAGATGGATGAGAAGCTATTCCTGTCATGTCACTCTCAGTATAAGGAGGAAGAAGCAATGCTAAACTCAGCAGCTGAGAAGAGGAAGGAAGCCTGGAAACAACTAGAGCATGCAGCAAGTCTCAAGCCTGTAATTGGAAATACTGCTGTTTTAGTATCTCCAATTTGA 1497 0.4349 MLKQFLSKLPRKTSKPDPNESCRDDSSRSSSSREASPRAAGKNNRSHGGGSSALKRTSSSAVFPASTVSVIEPLVPFKDVPNSEKMNLFVSKLSLCCVTFDFTDPGKDTVEKDVKRRTLVELVDFVSSYGSRFGEPAILAMCRMCAINLFRVFPPNYRSNRGGENDDDEPAFDPAWPHLQLVYELLLKFITSSCLDAKVAKKYIDHSFISRLLELFDSEDPRERDCLKTILHRVYGKFMVHRPYVRKSINNVFYRFVFETEKHNGIAELLEICGSVISGFALPLKEEHKIFLWRVLIPLHKPKSMGVYFQQLSYCVTQFIEKEPKLASIVIRGLLKYWPITHSQKEVMFLGELEEILETINMVEFQRVMVPLFWRIGCCINSLHFQVAERTLFLWNNDHIVNLIAHNRQVILPIIFPALEKNSQNHWNQAVLNLTHNIRKMFMEMDEKLFLSCHSQYKEEEAMLNSAAEKRKEAWKQLEHAASLKPVIGNTAVLVSPI* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01450 498 Gene3D - 81 481 IPR011989 -
Rops10g01450 498 SUPERFAMILY ARM repeat 87 478 IPR016024 -
Rops10g01450 498 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 483 IPR002554 GO:0000159|GO:0007165|GO:0019888
Rops10g01450 498 PIRSF PP2A_B56 3 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
Rops10g01450 498 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 81 481 - -
Rops10g01450 498 MobiDBLite consensus disorder prediction 1 57 - -
Rops10g01450 498 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 482 IPR002554 GO:0000159|GO:0007165|GO:0019888
Rops10g01450 498 MobiDBLite consensus disorder prediction 32 57 - -
Rops10g01450 498 MobiDBLite consensus disorder prediction 13 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01450 Rops-Chr10 27742185 27745367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01450 K11584 - gmx:100808283 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01450 10 27742185 27745367 Rops10g01450 10 27742185 27745367 ECH
Rops9g01856 9 33531543 33535339 Rops10g01450 10 27742185 27745367 PCT