LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops9g01852	ATGGAAGGTAGAGAAGAAGATAACTCCAATGGCACTGCAATTCCCAAAAAATCAAGATCCCTTGATCTTAAAAGTTTATATAAATCAAAATTGACAGAAGAGATTCCAAAGAAGAACTTAAAGAGGACAGGTAGTAGTCCCGGGGGTGGTGATGAGAAGAGGAACAAGAGAAAGAAGGCTAGAAAGGAAGTGTCTTTAAGTAGCTTAGAAAATGCTGATGGTAGCAGCAAGAAGGTTCTTGACGAAGAACGTCACAAAGGGCCAAATTCTGGTAGGCAAGATTCGTGTGGATTGAAGTTGGGGCTGAGTAAAGGATTGAGTAGCAGTAGTGGGCTCAATAGAGTTTCACTTAGTGTTGGTGGGGATCTTTGTATTCCTAAGCGAAAGAGGAATTTTGTGGGGCGGAAGAAATCTGAAGTTGGCCAAGCATCAAATTTGGCAGGGCATCCCAGTTGTAAAATTGGCGATGGTGATCATGAGCCTAAGTTAGGTAGTGATGAATCAAGTAGGGGGGTTGAGTCTTCAAAGATTAAACAGAAGAAATATTTTGATGAATTTAAGGAGAATAGGAGTAGCGATTCAAATTCAGTTCAGAATTTCAAGGAGAATGGGGATCGTGCTTCTCATTCTGTTGTAAATAGTGGTGATACCTCTTTAACAAAGTCTCGGAGGAAGAATAGGAAGCGAAAGGCTTTGGCTTCAGATAGAATTAGGGTTTCCAAGGAGGCTGAGCCTTTGATTGATAATTGTAAAATATCTGATGAAGTGCAGGAAGACGATGAGGAAAATCTTGAGGAGAATGCAGCAAGGATGCTTTCTTCAAGGTTTGATCCAAGCTGTACTGGGTTTTCTTCCAGTAGCAAGTCTTCTCCATTGCCATCGGCAAATGGTTTGTCGTTTTTGCTATCTTCTAGTCGAAATATTGTTAATCGCAGGTTGAAGTCTCGGTCGGGTTCGGAATCAGCATCGATTGATACTGCTGGCAGAATTTTGAGGCCAAGGAAACATGACAAAGATAAGGGTAATTCCAGGAAGAGGCGCCATTTTTATGAAATTCCAGTAGGTGATGTGGATGCGTATTGGGTATTGAACCGAAGAATTAAAGTATTTTGGCCTTTGGACCAGAGTTGGTATTATGGCCTTGTCTATGACTATGATGAAGAGAAAAAGCTTCACCATATCAAATATGATGATCGAGACGAAGAATGGATTAACCTCCAAACTGAGAGGTTTAAACTCCTGTTACTTCGTAATGAAGTTCCTGGAAATGTGAAGGGGGGAAGGGCTTTAGCAAAAAGTAGAAGTTCTGATAAGCAAAATGGAAGCAAGTCCAGAAAAGAAAGGCGAAGAAGAGAAGCGATTCCGAAGGATGATAGTTGTGGTGGGAGCTCTATGGACTCGGAGCCTATAATTTCATGGTTATACCGATCTTCTCATCGTCTTAAATCTTCTTTTCATGGCAATAAGAAACAGAAAACTTCTGTTACACTTCCAAGTACAAACTCATCCTTGTTATATGATGAACCTGTCACAGTCAAGGGACATACAGCTAAGAGTTCCTCGAGGGGTGTTAAAAATAGTTTGTCTAATGATTCTGTATCACAAGATAAGTTAGGTGATAATTTTAGGGAGAAATCCTCATTGCAAAGTGCCCCACACACCAAAGAAGGCAAACAGCCTATTGTTTATTACAGAAAACGGTTTCGGAGGCCAGCTCCAATATCCTCTCATGTGCCTGAAGAGAAAAATGTTATTGTAAGTGGAGCTTGTTCTATTTCCTTTGATAGTGTGGTTGTTGGGGTTGAGAATGTAAAAGAACCAAGTGACAAGAGGGTTGAGGTTGAGGGGCCACTGTGGTTCATCTACAATGAGGGAGTATCAAATTTTTTTTGGGACATGGGGTCAGCATCATTCAAAGTTGACTTAAACTTTCCAATACGTTTGGTGTTGAATGAAGCTTTTCAATCGGAGAATCTGTGGTTGTTCTATGCTGTTTTGCGGCTTCGGTATGGTACAGTAATGATCAAGTGGCCAAAAGTTTGTTTGGAGATGCTTTTTGTCGATAATGTGGTTGGATTGAGGTTTTTATTATTTGAAGGCTGCTTGAAGATGGCTGCAGCCTTTGTCTCTTTTGTCCTTAGGGTATTTCATCAACCTGCTCACCAAGGGAATGATGGCTTGCAGCTGCCATTTACATCTATTATATTCAAGTTTTCCAGTGTTCATATTATTAAGAAGCCCCTTGTGTTTGCACTCTATAATTTCTCCAGAGTGAAGAATTCTAAGTGGTTGTACTTAGATTCTAAGCTTAAGAGGCATTGCCTGCTCAGTAAACAGCTCCATCTTTCTGAATGCACATATGATAACATCCAGGCACTTCAAAATGGATCAAGTGAGTCCACCATGACTTCCATCAGTGAGCCCTCATCAGTCAAGGTCATGCGGAGGAGGAGTAGGCCAGGGATTAACATCATGGGTGTTTCCAAAGTGTCCACTCAAGTTGATGCTCATCTGTCTTCTGATGTTAGCGAGAGGAAGCTTCCTCCATTTGCTCTTTCTTTTGCTGCTGCACCTACATATTTTCTCTGTTTGCATCTTAAGTTGCTGATGGAGCAGTCGGCAGCCCGTATAAGCCTTTGTAATCATGCACCAAAAGATGATCAGGAAGACTCTGGTTTGGTGACAGATGACTGTTCTAGCATTGATGATTGCTCTAACAGGAATTCAGAAATTATTCTCAGGGAAGATATGATGACTTTGTCAAACAATGCTACAGGTGATGGATGGTCTTGTGCCGAGTTAGATCAGATAATTGGTCCCTCTACTTGTAGTGATCAAGTTCTCTCTCAAAATTACCAGAACATTGGTCTTAATGGTGCTGGAACTTCTGTTTCCCATGGTTCTGAGAGGCTTGGTACTATTCACTCACCAGACTGGCAATCACATCATTCATCGCTAGTGCTAGACTCTTTACCTTCAAGTTCTTTAAGACACCAGGATAATGCTGATAATGGTTCTCATTCTTTTATGGGTGATCTCAATGTCCAAATTCCTTCTATTGATGAATATGAGAAACCTAGTGCTCAAAACTCTCCTGATTTTTCTTGGAATATAAATGGAGGTGTTATTCCAAGCTCCAATCCAACTGCTCCAAGAAGTTCTTGGCATCGAAGCCGGAATAGTTCCTTGGGATTTCAGTCCCATGGGTGGTCTGATGGCAAGGCTGACTCTCTTTACAATGATTTTAGCAATGGACCCAAAAAGCCACGGACACAAGTATCATATTCAGTGCCTTTTGCAGGGTATGAATTTAGTTCTAGGCACAGAAACCATCATCAGAAAGGGCTTCCTCACAAACGAATTAGAAAGGCTAGTGAGAAAAAGTCATCAGATGTTGCTAGGGCCCCTGAAAAGAATTTTGAGTGCCTATATTGTGATGCAAATGTCTTGATTACTCTTGGTGATAAAGGGTGGCGAGAATCTGGGGCCCATGTTGTACTAGAGCTATTTGACCATAATGAGTGGAAACTCTCTGTCAAACTTTTAGGGGCTACAAGGTATTCATACAAAGCACATCAGTTTATGCAGCCTGGATCAACAAATCGTTTCACACATGCTATGATGTGGAAAGGAGGGAAGGATTGGATCTTGGAATTTCCTGATAGAAGTCAGTGGGCTCTTTTCAAGGAGATGCATGAGGAATGCTACAATCGGAACATCCGTGCTGCGTCTGTTAAAAACATACCTATTCCTGGTGTTCGCTTGATAGAAGAAAATGATGATAATGGATCCGAGGTAAATTTTGTTCGGAGCTGCAAGTATTTCCGACAGGTTGAAACAGATGTTGAGATGGCTCTGGATCCATCCCGTGTTTTATATGACATGGACAGCGAGGATGAGCAGTGGATTTCAAACATTCGAAATTCTGAAAATTATAACAGTGACTTGAATGGCATCATGGAGGATATGTTTGAGAAGGCAATGGACATTTTTGAAAAGGCTGCATACGCTCGACTGCGTGATCAGTTTACACCTAATGAAATAGAGGAACTCATGGTTAATGTTGGGCCTTCGTGTATAGTCAAAATCATTTATGACCATTGGCAGCAGAGAAGGCAGAAGAAGGGAATGGCTTTAATACGGCACTTTCAGCCGCCTCTATGGGAAAGATATCAACAACAAGTAAAGGAATGGGATGTAGCCCTGACCAAGAACAACCACCTTTCGTCTAATGGATCCCTGGATAAGGTTGCAACTTTGGAGAAGCCACCCATGTTTGCTTTTTGTTTGAAACCAAGGGGTTTGGAATCACTGAACAAGGGATTTAAACATAGATCACAAAAGAAAATTTCAGTCTCTGGGCATATAAACAGTATTGCTGAACAGGATGGCTTCCACACTTTTGGAAGAAGACTGAATGGCTTAGCATTTGGTGATGAAAAGTTTGTATACCCAGGCCACAATTACGATTCTTTGGATGATTCCCCGTTGCCTCAGACATCGCCAAGGGTATTCTCACCACGGGATGCTGGCTGCATGAGATATTATTCTATGAGCAATGATGGGCACTATAGAAACCATATTCCAAAATTTCACAGGAGCGAGTCCAAGAAATTCGGGTCATTTATGTATCATAATGATTCACAGATGATGCCTTCTTATAGTCAGAGAATGTCAGTGTCAGGAAAAAGAAATGGGGTTAGTAGGTGGAACATGGGCGATTATGACTTGCCAGGTCACAGGCACTACCTACTAGATGGCCCTCAGAGGCATGGGATTGAACAATTGGATGGTTCAGACCATGATGAGTTTAGATTGCGTGATGCATCAGGTGCTGCACAGCATTCACGTAACATGGCTAAGTTAAAGAGAGAGAGGGCTCAGAGATTGCTTTACAGAGCAGATCTAGCAATACACAAGGCTGTGTTTGCTCTTATGACTGCTGAAGCGATGAAAGCTTCTGAGGACTCGGTTGGTGATGGTAGTACGTCAAGCATCTGA	5001	0.4173	MEGREEDNSNGTAIPKKSRSLDLKSLYKSKLTEEIPKKNLKRTGSSPGGGDEKRNKRKKARKEVSLSSLENADGSSKKVLDEERHKGPNSGRQDSCGLKLGLSKGLSSSSGLNRVSLSVGGDLCIPKRKRNFVGRKKSEVGQASNLAGHPSCKIGDGDHEPKLGSDESSRGVESSKIKQKKYFDEFKENRSSDSNSVQNFKENGDRASHSVVNSGDTSLTKSRRKNRKRKALASDRIRVSKEAEPLIDNCKISDEVQEDDEENLEENAARMLSSRFDPSCTGFSSSSKSSPLPSANGLSFLLSSSRNIVNRRLKSRSGSESASIDTAGRILRPRKHDKDKGNSRKRRHFYEIPVGDVDAYWVLNRRIKVFWPLDQSWYYGLVYDYDEEKKLHHIKYDDRDEEWINLQTERFKLLLLRNEVPGNVKGGRALAKSRSSDKQNGSKSRKERRRREAIPKDDSCGGSSMDSEPIISWLYRSSHRLKSSFHGNKKQKTSVTLPSTNSSLLYDEPVTVKGHTAKSSSRGVKNSLSNDSVSQDKLGDNFREKSSLQSAPHTKEGKQPIVYYRKRFRRPAPISSHVPEEKNVIVSGACSISFDSVVVGVENVKEPSDKRVEVEGPLWFIYNEGVSNFFWDMGSASFKVDLNFPIRLVLNEAFQSENLWLFYAVLRLRYGTVMIKWPKVCLEMLFVDNVVGLRFLLFEGCLKMAAAFVSFVLRVFHQPAHQGNDGLQLPFTSIIFKFSSVHIIKKPLVFALYNFSRVKNSKWLYLDSKLKRHCLLSKQLHLSECTYDNIQALQNGSSESTMTSISEPSSVKVMRRRSRPGINIMGVSKVSTQVDAHLSSDVSERKLPPFALSFAAAPTYFLCLHLKLLMEQSAARISLCNHAPKDDQEDSGLVTDDCSSIDDCSNRNSEIILREDMMTLSNNATGDGWSCAELDQIIGPSTCSDQVLSQNYQNIGLNGAGTSVSHGSERLGTIHSPDWQSHHSSLVLDSLPSSSLRHQDNADNGSHSFMGDLNVQIPSIDEYEKPSAQNSPDFSWNINGGVIPSSNPTAPRSSWHRSRNSSLGFQSHGWSDGKADSLYNDFSNGPKKPRTQVSYSVPFAGYEFSSRHRNHHQKGLPHKRIRKASEKKSSDVARAPEKNFECLYCDANVLITLGDKGWRESGAHVVLELFDHNEWKLSVKLLGATRYSYKAHQFMQPGSTNRFTHAMMWKGGKDWILEFPDRSQWALFKEMHEECYNRNIRAASVKNIPIPGVRLIEENDDNGSEVNFVRSCKYFRQVETDVEMALDPSRVLYDMDSEDEQWISNIRNSENYNSDLNGIMEDMFEKAMDIFEKAAYARLRDQFTPNEIEELMVNVGPSCIVKIIYDHWQQRRQKKGMALIRHFQPPLWERYQQQVKEWDVALTKNNHLSSNGSLDKVATLEKPPMFAFCLKPRGLESLNKGFKHRSQKKISVSGHINSIAEQDGFHTFGRRLNGLAFGDEKFVYPGHNYDSLDDSPLPQTSPRVFSPRDAGCMRYYSMSNDGHYRNHIPKFHRSESKKFGSFMYHNDSQMMPSYSQRMSVSGKRNGVSRWNMGDYDLPGHRHYLLDGPQRHGIEQLDGSDHDEFRLRDASGAAQHSRNMAKLKRERAQRLLYRADLAIHKAVFALMTAEAMKASEDSVGDGSTSSI*	1667

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops9g01852	1666	MobiDBLite	consensus disorder prediction	153	191	-	-
	Rops9g01852	1666	Pfam	Enhancer of polycomb-like	1241	1333	IPR019542	-
	Rops9g01852	1666	MobiDBLite	consensus disorder prediction	1	234	-	-
	Rops9g01852	1666	PANTHER	ENHANCER OF POLYCOMB	1031	1663	IPR024943	GO:0006357\|GO:0032777\|GO:0035267
	Rops9g01852	1666	MobiDBLite	consensus disorder prediction	75	90	-	-
	Rops9g01852	1666	MobiDBLite	consensus disorder prediction	1108	1132	-	-
	Rops9g01852	1666	MobiDBLite	consensus disorder prediction	514	556	-	-
	Rops9g01852	1666	MobiDBLite	consensus disorder prediction	21	40	-	-
	Rops9g01852	1666	CDD	Tudor_Agenet_AtEML-like	363	413	-	-
	Rops9g01852	1666	Gene3D	-	364	409	-	-
	Rops9g01852	1666	MobiDBLite	consensus disorder prediction	102	116	-	-
	Rops9g01852	1666	MobiDBLite	consensus disorder prediction	47	66	-	-
	Rops9g01852	1666	MobiDBLite	consensus disorder prediction	514	536	-	-
	Rops9g01852	1666	MobiDBLite	consensus disorder prediction	425	465	-	-
	Rops9g01852	1666	MobiDBLite	consensus disorder prediction	192	219	-	-
	Rops9g01852	1666	MobiDBLite	consensus disorder prediction	438	457	-	-
	Rops9g01852	1666	MobiDBLite	consensus disorder prediction	312	344	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops9g01852	Rops-Chr9	33395503	33403740	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops9g01852	-		-	gmx:100781778	2211.8

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops9g01852	9	33395503	33403740	Rops10g01460	10	27865208	27871859	PCT